SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68474

Length: 248 nt

UniGene Fasta

>sp_v3.0_unigene68474
CGTCGTGACCTTGGCTGTCACTCAAGAATATTATCGCATGTCTAAGGGTAAAGGCAATTATCTTCTAGATGGAAGACCCAATCGCTATAAAGTTCTTCAGAAATGGATGGAAGATAAAGAAAAAACACGCAGTTCAAGAGGTAAGAAATCTCGCACAAAGCTGGCATCCTTGACTCAGGATTCATGCTTTTGGGCACATCTGGAAGAGGCTTTGAAAGATTTGGAAAATCTCAAACAACAGCAGCACC

Ace file of the UniGene sp_v3.0_unigene68474

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Sma3	Putative uncharacterized protein	-	-	2.176e-06	-

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002307051.1	PAD4 [Populus trichocarpa]	2.0e-13	47%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLQ6

Fln msg: Distance to subject end: 66 aas, your sequence is shorter than subject: 82 - 625

Fln protein: VVTLAVTQEYYRMSKGKGNYLLDGRPNRYKVLQKWMEDKEKTRSSRGKKSRTKLASLTQDSCFWAHLEEALKDLENLKQQQH

Protein Length: 83

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGAATATTATCGCATGTCTAAGGGTAAAGGCAATTATCTTCTAGATGGAAGACCCAATCGCTATAAAGTTCTTCAGAAATGGATGGAAGATAAAGAAAAAACACGCAGTTCAAGAGGTAAGAAATCTCGCACAAAGCTGGCATCCTTGACTCAGGATTCATGCTTTTGGGCACATCTGGAAGAGGCTTTGAAAGATTTGGAAAATCTCAAACAACAGCAGCACC

Fln Alignment:

GG46A6U01AS7I6___YYRMSKGKGNYLLDGRPNRYKVLQKWMEDKEKTRSSRGKKSRTKLASLTQDSCFWAHLEEALKDLENLKQQQH
B8LLQ6_______________YYRMSKGKGNYFSDGRPTRHKVLQKWLEEKERTRSSRGQKGRTKLASLTQDSCFWAHVEEASKDLENLKEDQH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain