SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68470

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene68470
CGTCGTGACCTTGGCTGTCACTCAATAAATATTGGAAATAAGGCAACAAAGGAAAAGCTTCTCGAAGCAATGGAAGGCCACATATTGGGAGTTACTCAGCTGGTATGCCATTATAGCAAGGAAAAGTTTACAACAGGTCGTGACTCTTATATGCCCGTGGGTGCACCTAATCACAG

Ace file of the UniGene sp_v3.0_unigene68470

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	1.0e-08	87%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	YbhB/YbcL	IPR005247	-	0.0	-
Sma3	Phosphatidylethanolamine-binding protein PEBP	IPR008914	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NTA9

Fln msg: STOP codon was not found. Distance to subject end: 19 aas, your sequence is shorter than subject: 58 - 194

Fln protein: RRDLGCHSINIGNKATKEKLLEAMEGHILGVTQLVCHYSKEKFTTGRDSYMPVGAPNH

Protein Length: 59

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATAAATATTGGAAATAAGGCAACAAAGGAAAAGCTTCTCGAAGCAATGGAAGGCCACATATTGGGAGTTACTCAGCTGGTATGCCATTATAGCAAGGAAAAGTTTACAACAGGTCGTGACTCTTATATGCCCGTGGGTGCACCTAATCACAG

Fln Alignment:

GG46A6U01BV3WM___INIGNKATKEKLLEAMEGHILGVTQLVCHYSK
A9NTA9_______________INIGNKVTKEKLVEAMEGHILGVAELVCHYSK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain