SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68291

Length: 181 nt

UniGene Fasta

>sp_v3.0_unigene68291
CGTCGTGACCTTGGCTGTCACTCAACTCAGGCTGCTGTAAGGGATTTCAGCCTGTACACAGGTTCTCTTGGAACAGCTTATTTGTGCTTCAAAGCTTATGAAGTGATGAAAAACCCAGATGACTTGACTCTATGTACACAGATTGTTGAACAATGTGCTACTGCTGCACAGGGCATGAGAG

Ace file of the UniGene sp_v3.0_unigene68291

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N1K0_POPTR	-	-	1.0e-08	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G52920.1	GCR2, GPCR G protein coupled receptor chr1:19709360-19711048 REVERSE LENGTH=410	2.0e-12	60%
RefSeq	Arabidopsis thaliana	NP_175700.2	G protein coupled receptor [Arabidopsis thaliana]	3.0e-12	60%
RefSeq	Populus trichocarpa	XP_002329106.1	predicted protein [Populus trichocarpa]	8.0e-13	57%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NV23

Fln msg: Distance to subject end: 307 aas, your sequence is shorter than subject: 60 - 427

Fln protein: RRDLGCHSTQAAVRDFSLYTGSLGTAYLCFKAYEVMKNPDDLTLCTQIVEQCATAAQGMR

Protein Length: 61

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACTCAGGCTGCTGTAAGGGATTTCAGCCTGTACACAGGTTCTCTTGGAACAGCTTATTTGTGCTTCAAAGCTTATGAAGTGATGAAAAACCCAGATGACTTGACTCTATGTACACAGATTGTTGAACAATGTGCTACTGCTGCACAGGGCATGAGAG

Fln Alignment:

GG46A6U01DHP5W___RDFSLYTGSLGTAYLCFKAYEVMKNPDDLTLCTQIVEQCATAAQGMR
A9NV23_______________RDPTVYKGLSGTAFMCFRSHQITGNNEDLALCSEIIDSCAAVARSLR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain