UniGene Name: sp_v3.0_unigene68253
Length: 235 nt
UniGene Fasta |
---|
>sp_v3.0_unigene68253
C |
Ace file of the UniGene sp_v3.0_unigene68253 |
---|
If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
Annotations |
---|
Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Os03g0793600 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DMU2_ORYSJ | - | - | 9.0e-23 | 80% |
FL-Next | Isoform 2 of Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 | - | - | 0.0 | 75% |
Sma3 | Type I inositol polyphosphate 5-phosphatase, putative | - | - | 5.032e-29 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | 2-alkenal reductase. | EC:1.3.1.74 | - | 1.298e-07 | - |
Sma3 | Inositol-polyphosphate 5-phosphatase. | EC:3.1.3.56 | - | 1.076e-19 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Inositol phosphate metabolism | 00562 | 1.076e-19 | % | |
Sma3 | Metabolic pathways | 01100 | 1.076e-19 | % | |
Sma3 | Phosphatidylinositol signaling system | 04070 | 1.076e-19 | % |
Source | Gene names |
---|---|
Sma3 | 5P1; 5P2; 5PT1; 5PT2; 5PT3; At1g05470; At1g34120; At2g01900; At2g32010; At2g37440; At3g63240; At3g63240/F16M2_90; At4g18010; At5g65090; B1040D06.9; B1339H09.16; CVP2; F12G12.6; F16M2_90; GSVIVT00008976001; GSVIVT00015827001; GSVIVT00020026001; GSVIVT00020 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | inositol or phosphatidylinositol phosphatase activity | GO:0004437 | Molecular Function | 0.0 | - |
Sma3 | inositol-polyphosphate 5-phosphatase activity | GO:0004445 | Molecular Function | 0.0 | - |
Sma3 | endonuclease activity | GO:0004519 | Molecular Function | 0.0 | - |
Sma3 | exonuclease activity | GO:0004527 | Molecular Function | 0.0 | - |
Sma3 | abscisic acid mediated signaling pathway | GO:0009738 | Biological Process | 0.0 | - |
Sma3 | seed germination | GO:0009845 | Biological Process | 0.0 | - |
Sma3 | procambium histogenesis | GO:0010067 | Biological Process | 0.0 | - |
Sma3 | leaf vascular tissue pattern formation | GO:0010305 | Biological Process | 0.0 | - |
Sma3 | cotyledon vascular tissue pattern formation | GO:0010588 | Biological Process | 0.0 | - |
Sma3 | cell differentiation | GO:0030154 | Biological Process | 0.0 | - |
Sma3 | inositol trisphosphate metabolic process | GO:0032957 | Biological Process | 0.0 | - |
Sma3 | inositol phosphate dephosphorylation | GO:0046855 | Biological Process | 0.0 | - |
Sma3 | inositol phosphate-mediated signaling | GO:0048016 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Inositol polyphosphate-related phosphatase | IPR000300 | - | 0.0 | - |
Sma3 | Carbohydrate/puine kinase, PfkB, conserved site | IPR002173 | - | 0.0 | - |
Sma3 | YLP motif | IPR004019 | - | 0.0 | - |
Sma3 | Endonuclease/exonuclease/phosphatase | IPR005135 | - | 0.0 | - |
Sma3 | TonB box, conserved site | IPR010916 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT3G63240.1 | DNAse I-like superfamily protein chr3:23364411-23366876 REVERSE LENGTH=547 | 8.0e-24 | 78% |
RefSeq | Arabidopsis thaliana | NP_191883.2 | endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] | 1.0e-23 | 78% |
RefSeq | Populus trichocarpa | XP_002312540.1 | predicted protein, partial [Populus trichocarpa] | 6.0e-25 | 82% |
Full-Lengther Next Prediction |
---|
Fln status: Internal
Fln database: sp_plants
Fln subject: Q9LR47-2
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 186 aas, your sequence is shorter than subject: 70 - 506
Fln protein:
R
Protein Length:
71
Fln nts:
C
Fln Alignment:
GG46A6U01CI19W___LSVWVRSALRHYIHNLKVSCVGRGLMGYLGNKGSISVSMTLHQTSFCFICSH
Q9LR47-2_____________LTIWVKSELREHVKNMKVSCVGRGLMGYLGNKGSISISMLLHQTSFCFVCTH
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain