SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68223

Length: 175 nt

UniGene Fasta

>sp_v3.0_unigene68223
CGTCGTGACCTTGGCTGTCACTCAATTTGACGCTGCAACTCCTGTTCTATTCGAAGTTATTAAAGCTCTCCAAAAGATGCACATATCTGTAGAACAGGTGCATGCAGAAGCAGGGAATGGCCAGTTTGAAATATCCTTGGGGCATTCACCTTGCATGGATGCAGCTGATAACTTA

Ace file of the UniGene sp_v3.0_unigene68223

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gb\|AEE79045.1\| glutamate-ammonia ligase-like protein [Arabidopsis thaliana]	-	-	2.0e-10	53%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	57%
Sma3	Glutamine synthetase I	-	-	2.437e-06	-

Source	GOs	Term	Type	e value	Identity
Sma3	glutamate-ammonia ligase activity	GO:0004356	Molecular Function	0.0	-
Sma3	glutamine biosynthetic process	GO:0006542	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glutamine synthetase, catalytic domain	IPR008146	-	0.0	-
Sma3	Glutamine synthetase/guanido kinase, catalytic domain	IPR014746	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G53180.1	" glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases chr3:19707068-19711188 FORWARD LENGTH=852"	2.0e-14	53%
RefSeq	Arabidopsis thaliana	NP_190886.4	glutamate-ammonia ligase-like protein [Arabidopsis thaliana]	3.0e-14	53%
RefSeq	Populus trichocarpa	XP_002326385.1	predicted protein [Populus trichocarpa]	1.0e-12	48%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5AJ73

Fln msg: Distance to subject end: 231 aas, your sequence is shorter than subject: 58 - 394

Fln protein: VVTLAVTQFDAATPVLFEVIKALQKMHISVEQVHAEAGNGQFEISLGHSPCMDAADNL

Protein Length: 59

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTGACGCTGCAACTCCTGTTCTATTCGAAGTTATTAAAGCTCTCCAAAAGATGCACATATCTGTAGAACAGGTGCATGCAGAAGCAGGGAATGGCCAGTTTGAAATATCCTTGGGGCATTCACCTTGCATGGATGCAGCTGATAACTTA

Fln Alignment:

GG46A6U01BKLG3___AVTQFDAATPVLFEVIKALQKMHISVEQVHAEAGNGQFEISLGHSPCMDAADNL
A5AJ73_______________STSAFDAASPIFHEVLAALQSLNVPVEQLHAEAGKGQFEIALGHTVCSCSADNL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain