SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene67869

Length: 281 nt

UniGene Fasta

>sp_v3.0_unigene67869
CGTCGTGACCTTGGCTGTCACTCAAATGGTGCTGTAGTCATCTCAACCATTAACCGGACTATACGATCATATTTTATGGCCATTGTTGCAGCTGAATACATACTAGGCTGGTTGCCAAGAGGAACACATGATTGGTCCAATTTAATTACTCCCGTCGAGCTTGTTTTGCTGATGAAACGTGCTTCTATTTCGGTTCATGAAATGGCAGGACTTGTCTACAATCCTTTGAGGAATGATTGGACATTATCTGATGATACAGATGTCAACTATATTGTCTTTGG

Ace file of the UniGene sp_v3.0_unigene67869

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative dihydroxypolyprenylbenzoate methyltransferase n=1 Tax=Oryza sativa Japonica Group RepID=Q5VMJ1_ORYSJ	-	-	1.0e-29	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%

Source	Gene names
Sma3	At2g30920; COQ3; EMB3002; F7F1.13; GSVIVT00011890001; Os06g0152300; OsI_21708; OsI_21709; OsJ_20155; P0529C07.34; P0710H01.46; PHYPADRAFT_24690; POPTRDRAFT_1098459; RCOM_1251500; VITISV_030437;

Source	GOs	Term	Type	Identity
Sma3	mitochondrial envelope	GO:0005740	Cellular Component	-
Sma3	mitochondrial matrix	GO:0005759	Cellular Component	-
Sma3	hexaprenyldihydroxybenzoate methyltransferase activity	GO:0004395	Molecular Function	-
Sma3	2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity	GO:0008425	Molecular Function	-
Sma3	ubiquinone biosynthetic process	GO:0006744	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ubiquinone biosynthesis O-methyltransferase	IPR010233	-	0.0	-
Sma3	Methyltransferase type 11	IPR013216	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G30920.1	ATCOQ3, EMB3002, COQ3 coenzyme Q 3 chr2:13157409-13159824 REVERSE LENGTH=322	8.0e-32	58%
RefSeq	Arabidopsis thaliana	NP_180649.1	Hexaprenyldihydroxybenzoate methyltransferase [Arabidopsis thaliana]	1.0e-31	58%
RefSeq	Populus trichocarpa	XP_002320841.1	predicted protein [Populus trichocarpa]	2.0e-33	62%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LPB3

Fln msg: STOP codon was not found. Distance to subject end: 5 aas, your sequence is shorter than subject: 93 - 315

Fln protein: RRDLGCHSNGAVVISTINRTIRSYFMAIVAAEYILGWLPRGTHDWSNLITPVELVLLMKRASISVHEMAGLVYNPLRNDWTLSDDTDVNYIVF

Protein Length: 94

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATGGTGCTGTAGTCATCTCAACCATTAACCGGACTATACGATCATATTTTATGGCCATTGTTGCAGCTGAATACATACTAGGCTGGTTGCCAAGAGGAACACATGATTGGTCCAATTTAATTACTCCCGTCGAGCTTGTTTTGCTGATGAAACGTGCTTCTATTTCGGTTCATGAAATGGCAGGACTTGTCTACAATCCTTTGAGGAATGATTGGACATTATCTGATGATACAGATGTCAACTATATTGTCTTTGG

Fln Alignment:

GG46A6U01CL30F___NGAVVISTINRTIRSYFMAIVAAEYILGWLPRGTHDWSNLITPVELVLLMKRASISVHEMAGLVYNPLRNDWTLSDDTDVNYIVF
B8LPB3_______________SGAVVISTINRTIRSYFMAIVAAEYILGWLPRGTHDWSNLITPIELVLLMKRASISVHEVAGLVYNPLRNDWTLSDDTEVNYIAF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain