SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene67137

Length: 245 nt

UniGene Fasta

>sp_v3.0_unigene67137
CGTCGTGACCTTGGCTGTCACTCAGGCCATTGTTGTCACTGGTAATGGAGGCAATTCTCAGGTGGTTTTGACATCAATGTTCTCCAGGAAGTACAATAGATTGGGGAACTTGTCACATTTGGGTAGAGTTTCTGTTGATCTTTTGATCAATACTATTGAAGAGGCTAAGAAACTTTCCGTAGCTGCTATTCAAGGGCTTGCACTTGGTGGTGGATTAGAATCAGCAATGTCTTGTCATGCTCGTA

Ace file of the UniGene sp_v3.0_unigene67137

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ECH domain containing protein	-	-	3.0e-06	30%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%

Source	Gene names
Sma3	GSVIVT00016719001; PHYPADRAFT_129343; PHYPADRAFT_218894; VITISV_006222;

Source	GOs	Term	Type	Identity
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	coenzyme binding	GO:0050662	Molecular Function	-
Sma3	fatty acid metabolic process	GO:0006631	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Crotonase, core	IPR001753	-	-
Sma3	3-hydroxyacyl-CoA dehydrogenase, C-terminal	IPR006108	-	-
Sma3	3-hydroxyacyl-CoA dehydrogenase, NAD binding	IPR006176	-	-
Sma3	3-hydroxyacyl-CoA dehydrogenase, conserved site	IPR006180	-	-
Sma3	Dehydrogenase, multihelical	IPR013328	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Enoyl-CoA hydratase/isomerase, conserved site	IPR018376	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LR51

Fln msg: Distance to subject end: 600 aas, your sequence is shorter than subject: 81 - 723

Fln protein: VVTLAVTQAIVVTGNGGNSQVVLTSMFSRKYNRLGNLSHLGRVSVDLLINTIEEAKKLSVAAIQGLALGGGLESAMSCHAR

Protein Length: 82

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGCCATTGTTGTCACTGGTAATGGAGGCAATTCTCAGGTGGTTTTGACATCAATGTTCTCCAGGAAGTACAATAGATTGGGGAACTTGTCACATTTGGGTAGAGTTTCTGTTGATCTTTTGATCAATACTATTGAAGAGGCTAAGAAACTTTCCGTAGCTGCTATTCAAGGGCTTGCACTTGGTGGTGGATTAGAATCAGCAATGTCTTGTCATGCTCGTA

Fln Alignment:

GG46A6U01DP277___QAIVVTGNGGNSQVVLTSMFSRKYNRLGNLSHLGRVSVDLLINTIEEAKKLSVXXXXXXXXXXXXESAMSCHAR
B8LR51_______________KAIVVTGNGGKFSGGFDINVIQEVQQTGNLSHLGRVSVDLMINTIEDAKKPSVAAIQGLALGGGLELAMSCHAR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain