SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene66951

Length: 204 nt

UniGene Fasta

>sp_v3.0_unigene66951
CGTCGTGACCTTGGCTGTCACTCAATCTGATTGGGAGAGCCATTTGCAATGTAATGGTCAATCCATATTATGGGATTTGAGGAATCCTTTAAAAGCAGGGCTAGCAGCAGCTGCTGAACATCTAGCTGGCCTAGTGCCACTTCATTTGACTTATAGCCATTTTTGCTCATGAAAATGCAATCCAAGATTGGCTTTGGTCTTTCG

Ace file of the UniGene sp_v3.0_unigene66951

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	67%
Sma3	Putative uncharacterized protein OJ1057_F01.24	-	-	8.285e-06	-

Source	Gene names
Sma3	GSVIVT00033781001; OJ1057_F01.24; Os02g0469200; OsI_07162; OsJ_06679; POPTRDRAFT_274215; POPTRDRAFT_560714; RCOM_0589300;

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G58100.1	" unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444	3.0e-11	67%
RefSeq	Arabidopsis thaliana	NP_200618.3	uncharacterized protein [Arabidopsis thaliana]	4.0e-11	67%
RefSeq	Populus trichocarpa	XP_002308138.1	predicted protein [Populus trichocarpa]	1.0e-12	67%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9HBD1

Fln msg: Overlapping hits, possible frame ERROR between 160 and 150, Distance to subject end: 160 aas, your sequence is shorter than subject: 68 - 949

Fln protein: VVTLAVTQSDWESHLQCNGQSILWDLRNPLKAGLAAAAEHLAGLVPLHLxxxxxFAHENAIQDWLWSF

Protein Length: 69

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCTGATTGGGAGAGCCATTTGCAATGTAATGGTCAATCCATATTATGGGATTTGAGGAATCCTTTAAAAGCAGGGCTAGCAGCAGCTGCTGAACATCTAGCTGGCCTAGTGCCACTTCATTTGxxxxxxxxxxxxxxxTTTGCTCATGAAAATGCAATCCAAGATTGGCTTTGGTCTTTCG

Fln Alignment:

GG46A6U01ELOFX___VVTLAVTQSDWESHLQCNGQSILWDLRNPXXXXXXXXXXXXXXXVPLHxxxxxAHENAIQDWLWS
B9HBD1_______________VIVVQSEPSSWESHLQCNGQSVLWDLRSPVKAALASVSEHLAGLLPLHxxxxxAHETAIEDWVWS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain