SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene66812

Length: 120 nt

UniGene Fasta

>sp_v3.0_unigene66812
CGTCGTGACCTTGGCTGTCACTCATGATTTGGGTCAACTGCTACTATGCATTTGATTCTGATGCTCCGTTTGGAGGGTACAAGATGAGTGGAATTGGCAGAGAACAGGGTCTTGATGCTC

Ace file of the UniGene sp_v3.0_unigene66812

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytosolic aldehyde dehydrogenase RF2D n=3 Tax=Andropogoneae RepID=Q8S529_MAIZE	-	-	1.0e-08	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	65%

Source	Gene names
Sma3	Os01g0591300; OsI_02651; OsI_02656; OsJ_02431; P0710A02.8; rf2d;

Source	GOs	Term	Type	e value	Identity
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G24503.1	ALDH2C4, ALDH1A, REF1 aldehyde dehydrogenase 2C4 chr3:8919732-8923029 REVERSE LENGTH=501	1.0e-10	68%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NUF6

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 20 aas, your sequence is shorter than subject: 39 - 544

Fln protein: S*PWLSLMIWVNCYYAFDSDAPFGGYKMSGIGREQGLDA

Protein Length: 40

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGATTTGGGTCAACTGCTACTATGCATTTGATTCTGATGCTCCGTTTGGAGGGTACAAGATGAGTGGAATTGGCAGAGAACAGGGTCTTGATGCTC

Fln Alignment:

GG46A6U01DELI8___IWVNCYYAFDSDAPFGGYKMSGIGREQGL
A9NUF6_______________VWVNCFDIFDAGIPFGGYKMSGTGREKGI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain