UniGene Name: sp_v3.0_unigene66602
Length: 248 nt
UniGene Fasta |
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>sp_v3.0_unigene66602
C |
Ace file of the UniGene sp_v3.0_unigene66602 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | telomere binding protein [Solanum lycopersicum] | - | - | 4.0e-15 | 75% |
FL-Next | Isoform 4 of Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1 | - | - | 0.0 | 77% |
Sma3 | MYB transcription factor | - | - | 1.695e-08 | - |
Source | Gene names |
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Sma3 | AT3G12560; AT5G59430; At1g07540; At3g12560; At3g46590; At3g53790; At5g13820; At5g59430; BPF-1; F12A12.110; F5K20_90; GSVIVT00018467001; GSVIVT00021331001; GSVIVT00024297001; HPPBF-1; IBP1; IBP2; LOC_Os03g16700; LeTBP1; NtTBP1; Os03g0274300; OsI_09453; OsI |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | chromosome, telomeric region | GO:0000781 | Cellular Component | 0.0 | - |
Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | DNA binding | GO:0003677 | Molecular Function | 0.0 | - |
Sma3 | DNA binding, bending | GO:0008301 | Molecular Function | 0.0 | - |
Sma3 | telomeric DNA binding | GO:0042162 | Molecular Function | 0.0 | - |
Sma3 | protein modification process | GO:0006464 | Biological Process | 0.0 | - |
Sma3 | response to ethylene stimulus | GO:0009723 | Biological Process | 0.0 | - |
Sma3 | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | - |
Sma3 | response to gibberellin stimulus | GO:0009739 | Biological Process | 0.0 | - |
Sma3 | response to salicylic acid stimulus | GO:0009751 | Biological Process | 0.0 | - |
Sma3 | response to jasmonic acid stimulus | GO:0009753 | Biological Process | 0.0 | - |
Sma3 | GO:0045449 | Biological Process | 0.0 | - | |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Peptidase S8/S53, subtilisin/kexin/sedolisin | IPR000209 | - | 0.0 | - |
Sma3 | Ubiquitin | IPR000626 | - | 0.0 | - |
Sma3 | SANT/Myb domain | IPR001005 | - | 0.0 | - |
Sma3 | IPR012287 | - | 0.0 | - | |
Sma3 | IPR014778 | - | 0.0 | - | |
Sma3 | Myb domain, DNA-binding | IPR017930 | - | 0.0 | - |
Sma3 | Glycoside hydrolase, family 1, active site | IPR018120 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G59430.1 | ATTRP1, TRP1 telomeric repeat binding protein 1 chr5:23968254-23970695 FORWARD LENGTH=578 | 4.0e-19 | 77% |
RefSeq | Arabidopsis thaliana | NP_001078771.1 | Telomere repeat-binding protein 1 [Arabidopsis thaliana] | 5.0e-19 | 77% |
RefSeq | Populus trichocarpa | XP_002316279.1 | predicted protein, partial [Populus trichocarpa] | 3.0e-21 | 60% |
Full-Lengther Next Prediction |
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Fln status: Putative C-terminus
Fln database: sp_plants
Fln subject: Q8L7L8-4
Fln msg: query STOP codon is far from subject stop. Distance to subject end: 17 aas, your sequence is shorter than subject: 59 - 577
Fln protein:
V
Protein Length:
60
Fln nts:
C