SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene66263

Length: 413 nt

UniGene Fasta

>sp_v3.0_unigene66263
CGTCGTGACCTTGGCTGTCACTCAGTGTGAAAGAGGGTCAGTTCATCGTCATTCCGCAATTCTATGCAGTCATCAAGCAAGCAGGAGACGATGGGTTGGAGTATATAACGTTTACAACATCGGACAATTCATACCGGTCGACTCTGGCGGGAAGGCAGTCAGTTTTGAAGGCGATGCCGGAGGAAGTGTTGCGTGCCGCGTACAGGATCGACCAAAATGAAGTTGAACAAGTGATGAGGAACAGAGAGCACGACACACTCATTCTGCCTCCATCGTCAGGCTTTGGACGTTACCAAGATCAACAACAGAACGTCACATCTCTTCTCGTCCAAGTGGCATAGGACGTTTGAGTATTATCCACACGCGGCCTGCTTCACTCTGTCCACTGCTTGCCCTGCCTGCTAGCTAGCTTA

Ace file of the UniGene sp_v3.0_unigene66263

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Legumin-like storage protein n=1 Tax=Picea glauca RepID=Q40870_PICGL	-	-	2.0e-35	78%
FL-Next	tr=Legumin-like storage protein; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	78%
Sma3	Legumin	-	-	8.957e-25	-

Source	Gene names
Sma3	Leg1; Leg18; Leg2; Leg26; Leg3; Leg31; Leg4;

Source	GOs	Term	Type	e value	Identity
Sma3	nutrient reservoir activity	GO:0045735	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	11-S seed storage protein, plant	IPR006044	-	-
Sma3	Cupin 1	IPR006045	-	-
Sma3	Inorganic pyrophosphatase	IPR008162	-	-
Sma3	RmlC-like jelly roll fold	IPR014710	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q40870

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 113 - 509

Fln protein: S*PWLSLSVKEGQFIVIPQFYAVIKQAGDDGLEYITFTTSDNSYRSTLAGRQSVLKAMPEEVLRAAYRIDQNEVEQVMRNREHDTLILPPSSGFGRYQDQQQNVTSLLVQVA*

Protein Length: 114

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGTGAAAGAGGGTCAGTTCATCGTCATTCCGCAATTCTATGCAGTCATCAAGCAAGCAGGAGACGATGGGTTGGAGTATATAACGTTTACAACATCGGACAATTCATACCGGTCGACTCTGGCGGGAAGGCAGTCAGTTTTGAAGGCGATGCCGGAGGAAGTGTTGCGTGCCGCGTACAGGATCGACCAAAATGAAGTTGAACAAGTGATGAGGAACAGAGAGCACGACACACTCATTCTGCCTCCATCGTCAGGCTTTGGACGTTACCAAGATCAACAACAGAACGTCACATCTCTTCTCGTCCAAGTGGCATAG___GACGTTTGAGTATTATCCACACGCGGCCTGCTTCACTCTGTCCACTGCTTGCCCTGCCTGCTAGCTAGCTTA

Fln Alignment:

GG46A6U01CVNA9___VKEGQFIVIPQFYAVIKQAGDDGLEYITFTTSDNSYRSTLAGRQSVLKAMPEEVLRAAYRIDQNEVEQVMRNREHDTLILPPSSGFGRYQDQQQNVTS
Q40870_______________VREGQFIVIPQFYAVIKQAGDEGFEWITFTTSDISFQSFLAGRQSVLKAMPEEVLSAAYRMDRTEVRQIMRNRERDTLILPPSS-LGRDQEQQHNITS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain