SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene66211

Length: 219 nt

UniGene Fasta

>sp_v3.0_unigene66211
CGTCGTGACCTTGGCTGTCACTCATTTTGGGTTTGATGAATTTTTGAGTCTGTACAATAGCCTCTGGAACGATGATCAGGATGAAGAGCACGCTGATGGAGACAATGGCTTGGAATGTCATGGTGAATTGATGCAAGTGTTTAAGGTGTTTGACAGGGATGGAGATGGGTACATATGTGCTTCTGAGCTACAGCAGATTTTAGAATCGCTTGGACTGAA

Ace file of the UniGene sp_v3.0_unigene66211

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative calcium-binding protein n=1 Tax=Gossypium hirsutum RepID=A4L9I0_GOSHI	-	-	2.0e-06	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	39%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A8C1

Fln msg: Distance to subject end: 43 aas, your sequence is shorter than subject: 72 - 252

Fln protein: VVTLAVTHFGFDEFLSLYNSLWNDDQDEEHADGDNGLECHGELMQVFKVFDRDGDGYICASELQQILESLGL

Protein Length: 73

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTGGGTTTGATGAATTTTTGAGTCTGTACAATAGCCTCTGGAACGATGATCAGGATGAAGAGCACGCTGATGGAGACAATGGCTTGGAATGTCATGGTGAATTGATGCAAGTGTTTAAGGTGTTTGACAGGGATGGAGATGGGTACATATGTGCTTCTGAGCTACAGCAGATTTTAGAATCGCTTGGACTGAA

Fln Alignment:

GG46A6U01DODOO___AVTHFGFDEFLSLYNSLWNDDQDEEHADGDNGLECHGELMQVFKVFDRDGDGYICASELQQILESLGL
D5A8C1_______________SLEHMSFDDFCRFLLDMW--EEAREHAETEE--KVLSELVEAFGVFDKNGDGFISPFELQQVLLSLGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain