SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene66091

Length: 237 nt

UniGene Fasta

>sp_v3.0_unigene66091
CGTCGTGACCTTGGCTGTCACTCAATTGCTGGTCTCTCGGCCAGCCAGTCAGTTGCAGACAAATGGGTCAGCGATAATATTGTTCCCTTCTATCCTGCAACCGAGATCAATATAATCCTGGTGGGGAATGAAATTTTAACAGACTACTGCAACAAACAGACCTGGTACCAACTAGTGCCCGCTATGGAGAGCATCTGGCAAGCTCTAGTTAATTATAATCTGGATCATATCAATGTT

Ace file of the UniGene sp_v3.0_unigene66091

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative glucan endo-1,3-beta-glucosidase A6 [Arabidopsis thaliana] sp\|Q06915.1\|EA6_ARATH RecName: Full=Probable glucan endo-1,3-beta-glucosidase A6; AltName: Full=(1->3)-beta-glucan endohydrolase; Short=(1->3)-beta-glucanase; AltName: Full=Anther-specifi	-	-	6.0e-10	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G14080.1	MEE48 O-Glycosyl hydrolases family 17 protein chr4:8118697-8120292 REVERSE LENGTH=478	6.0e-14	45%
RefSeq	Arabidopsis thaliana	NP_193144.1	putative glucan endo-1,3-beta-glucosidase A6 [Arabidopsis thaliana]	8.0e-14	45%
RefSeq	Populus trichocarpa	XP_002334812.1	predicted protein [Populus trichocarpa]	9.0e-13	45%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AAN5

Fln msg: Distance to subject end: 305 aas, your sequence is shorter than subject: 79 - 462

Fln protein: RRDLGCHSIAGLSASQSVADKWVSDNIVPFYPATEINIILVGNEILTDYCNKQTWYQLVPAMESIWQALVNYNLDHINV

Protein Length: 80

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTGCTGGTCTCTCGGCCAGCCAGTCAGTTGCAGACAAATGGGTCAGCGATAATATTGTTCCCTTCTATCCTGCAACCGAGATCAATATAATCCTGGTGGGGAATGAAATTTTAACAGACTACTGCAACAAACAGACCTGGTACCAACTAGTGCCCGCTATGGAGAGCATCTGGCAAGCTCTAGTTAATTATAATCTGGATCATATCAATGTT

Fln Alignment:

GG46A6U01B85RF___IAGLSASQSVADKWVSDNIVPFYPATEINIILVGNEILTDYCNKQTWYQLVPAMESIWQALVNYNLDHINV
D5AAN5_______________IANVSSNQSFANKWVKNNVVYFYPATRINIILVGNEILSDYSNNQTWYQLVPAMLRIRRALLRYKLHHIKV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain