SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene65845

Length: 212 nt

UniGene Fasta

>sp_v3.0_unigene65845
CGCGTGGGACCTGCCGTGCCGTTCATTGACCTTGTGCTGCAGAGCCAACGCTTTTACCTTTTGGACGATCACTGGAGCTAACTCCATGGTGTATGTTACTGATAAGGTGTTGTGTCTAGGATTTGTTGATGCAGGGGAGGATCCAGTGACATCGATTGTGATAGGGACGTATCAGATGCAGGACAATCTGCTCCAATTCGATGTGCCAACTC

Ace file of the UniGene sp_v3.0_unigene65845

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae]	-	-	1.0e-15	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%
Sma3	Basic 7S globulin 2 small subunit, putative	-	-	7.939e-12	-

Source	Gene names
Sma3	ACI25; EDGP1; GSVIVT00019908001; GSVIVT00019909001; GSVIVT00023702001; GSVIVT00023703001; GSVIVT00028479001; NEC4; POPTRDRAFT_416930; POPTRDRAFT_643329; RCOM_0912810; RCOM_0912820; RCOM_0912830; VITISV_011733; VITISV_038701; Xegip;

Source	GOs	Term	Type	e value	Identity
Sma3	aspartic-type endopeptidase activity	GO:0004190	Molecular Function	0.0	-
Sma3	proteolysis	GO:0006508	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase A1	IPR001461	-	0.0	-
Sma3	Peptidase aspartic, catalytic	IPR009007	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G03230.1	Eukaryotic aspartyl protease family protein chr1:790110-791414 FORWARD LENGTH=434	2.0e-14	60%
RefSeq	Arabidopsis thaliana	NP_563679.1	aspartyl protease-like protein [Arabidopsis thaliana]	2.0e-14	60%
RefSeq	Populus trichocarpa	XP_002308984.1	predicted protein, partial [Populus trichocarpa]	1.0e-17	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LN22

Fln msg: Distance to subject end: 25 aas, your sequence is shorter than subject: 70 - 422

Fln protein: AWDLPCRSLTLCCRANAFTFWTITGANSMVYVTDKVLCLGFVDAGEDPVTSIVIGTYQMQDNLLQFDVPT

Protein Length: 71

Fln nts: CGCGTGGGACCTGCCGTGCCGTTCATTGACCTTGTGCTGCAGAGCCAACGCTTTTACCTTTTGGACGATCACTGGAGCTAACTCCATGGTGTATGTTACTGATAAGGTGTTGTGTCTAGGATTTGTTGATGCAGGGGAGGATCCAGTGACATCGATTGTGATAGGGACGTATCAGATGCAGGACAATCTGCTCCAATTCGATGTGCCAACTC

Fln Alignment:

GFXCM5X02HK6DX___SLTLCCRANAFTFWTITGANSMVYVTDKVLCLGFVDAGEDPVTSIVIGTYQMQDNLLQFDVPT
B8LN22_______________TIDIVLQGNSTTTWRIFGANSMVRVNNKVLCLGFVDGGDNLQQSIVIGTYQMQDNLLQFDLAT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain