UniGene Name: sp_v3.0_unigene65804
Length: 113 nt
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>sp_v3.0_unigene65804
C |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA | - | - | 8.0e-11 | 91% |
FL-Next | tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). | - | - | 0.0 | 91% |
Sma3 | Class III homeodomain-leucine zipper protein C3HDZ2 | - | - | 2.857e-10 | - |
Source | Gene names |
---|---|
Sma3 | AT1G52150; ATHB-15; ATHB-8; ATHB8; AVB1; At1g52150; At4g32880; At5g60690; C3HDZ1; C3HDZ2; C3HDZ3; CNA; GSVIVT00018188001; GSVIVT00024542001; GSVIVT00032411001; GSVIVT00034328001; HB-3; HB1; HB2; HB5; HB6; HB7; HB8; HDZ31; HOX32; ICU4; IFL1; MUP24.16; OsI_ |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | sequence-specific DNA binding transcription factor activity | GO:0003700 | Molecular Function | 0.0 | - |
Sma3 | signal transducer activity | GO:0004871 | Molecular Function | 0.0 | - |
Sma3 | sequence-specific DNA binding | GO:0043565 | Molecular Function | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | signal transduction | GO:0007165 | Biological Process | 0.0 | - |
Sma3 | positive regulation of cell proliferation | GO:0008284 | Biological Process | 0.0 | - |
Sma3 | response to auxin stimulus | GO:0009733 | Biological Process | 0.0 | - |
Sma3 | determination of bilateral symmetry | GO:0009855 | Biological Process | 0.0 | - |
Sma3 | polarity specification of adaxial/abaxial axis | GO:0009944 | Biological Process | 0.0 | - |
Sma3 | radial pattern formation | GO:0009956 | Biological Process | 0.0 | - |
Sma3 | meristem initiation | GO:0010014 | Biological Process | 0.0 | - |
Sma3 | xylem and phloem pattern formation | GO:0010051 | Biological Process | 0.0 | - |
Sma3 | primary shoot apical meristem specification | GO:0010072 | Biological Process | 0.0 | - |
Sma3 | xylem development | GO:0010089 | Biological Process | 0.0 | - |
Sma3 | cell differentiation | GO:0030154 | Biological Process | 0.0 | - |
Sma3 | positive regulation of cell differentiation | GO:0045597 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Homeodomain | IPR001356 | - | 0.0 | - |
Sma3 | Lipid-binding START | IPR002913 | - | 0.0 | - |
Sma3 | Basic-leucine zipper domain | IPR004827 | - | 0.0 | - |
Sma3 | Phosphopantetheine attachment site | IPR006162 | - | 0.0 | - |
Sma3 | IPR012287 | - | 0.0 | - | |
Sma3 | MEKHLA | IPR013978 | - | 0.0 | - |
Sma3 | Homeobox, conserved site | IPR017970 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT1G52150.2 | - | 1.0e-11 | 81% |
RefSeq | Arabidopsis thaliana | NP_001077702.1 | homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana] | 2.0e-11 | 81% |
RefSeq | Populus trichocarpa | XP_002299735.1 | predicted protein [Populus trichocarpa] | 2.0e-11 | 81% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q0Q419
Fln msg: Distance to subject end: 71 aas, your sequence is shorter than subject: 37 - 840
Fln protein:
D
Protein Length:
38
Fln nts:
C
Fln Alignment:
GFXCM5X02HMAVK___DGIMCCSWKPLPVFTIRLNQAGLDMLETTLVALQDIS
Q0Q419_______________DGIMCCSWKPLPVFTF-ANQAGLDMLETTLVALQDIS
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain