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UniGene Name: sp_v3.0_unigene65768
Length: 213 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene65768
G |
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Ace file of the UniGene sp_v3.0_unigene65768 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
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Go to the Tablet ACE viewer Web
| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | UDP-glucose 6-dehydrogenase, putative n=4 Tax=rosids RepID=B9REG4_RICCO | - | - | 4.0e-18 | 85% |
| FL-Next | sp=UDP-glucose 6-dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 97% |
| Sma3 | UDP-glucose dehydrogenase | - | - | 4.01e-21 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | UDP-glucose 6-dehydrogenase. | EC:1.1.1.22 | - | 5.174e-19 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Pentose and glucuronate interconversions | 00040 | 5.174e-19 | % | |
| Sma3 | Ascorbate and aldarate metabolism | 00053 | 5.174e-19 | % | |
| Sma3 | Starch and sucrose metabolism | 00500 | 5.174e-19 | % | |
| Sma3 | Amino sugar and nucleotide sugar metabolism | 00520 | 5.174e-19 | % | |
| Sma3 | Metabolic pathways | 01100 | 5.174e-19 | % | |
| Sma3 | Biosynthesis of secondary metabolites | 01110 | 5.174e-19 | % |
| Source | Gene names |
|---|---|
| Sma3 | At1g26570; At3g01010; At5g15490; GSVIVT00016253001; GSVIVT00021053001; GSVIVT00030060001; LOC_Os03g31210; LOC_Os03g55070; LOC_Os12g25690; LOC_Os12g25700; OSJNBa0020H02.10; OSJNBa0040E01.8; Os03g0425600; Os03g0757900; Os12g0443500; Os12g0443600; OsI_12127; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
| Sma3 | UDP-glucose 6-dehydrogenase activity | GO:0003979 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0016616 | Molecular Function | 0.0 | - |
| Sma3 | NAD binding | GO:0051287 | Molecular Function | 0.0 | - |
| Sma3 | metabolic process | GO:0008152 | Biological Process | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | UDP-glucose/GDP-mannose dehydrogenase, N-terminal | IPR001732 | - | 0.0 | - |
| Sma3 | Dehydrogenase, multihelical | IPR013328 | - | 0.0 | - |
| Sma3 | UDP-glucose/GDP-mannose dehydrogenase, dimerisation | IPR014026 | - | 0.0 | - |
| Sma3 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal | IPR014027 | - | 0.0 | - |
| Sma3 | IPR014028 | - | 0.0 | - | |
| Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
| Sma3 | Nucleotide sugar dehydrogenase | IPR017476 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT5G39320.1 | UDP-glucose 6-dehydrogenase family protein chr5:15743254-15744696 FORWARD LENGTH=480 | 6.0e-18 | 74% |
| RefSeq | Arabidopsis thaliana | NP_198748.1 | putative UDP-glucose 6-dehydrogenase 2 [Arabidopsis thaliana] | 7.0e-18 | 74% |
| RefSeq | Populus trichocarpa | XP_002306064.1 | predicted protein [Populus trichocarpa] | 5.0e-18 | 88% |
| Full-Lengther Next Prediction |
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Fln status: Putative C-terminus
Fln database: coniferopsida.fasta
Fln subject: B8LPB2
Fln msg: Separated hits, possible frame ERROR between 115 and 117, and overlapping frame ERROR between 164 and 157, STOP codon was not found. Distance to subject end: 5 aas, your sequence is shorter than subject: 72 - 482
Fln protein:
P
Protein Length:
73
Fln nts:
G
Fln Alignment:
GFXCM5X02GWKE7___NAHGVCILTEWDEFKNLDYDKIYENMEKPAFVFDGxRNVVDAERLRKIKxxxVYSVGKPLDPWIKDL
B8LPB2_______________NAHGVCILTEWDEFKNLDYDKIYQNMEKPAFVFDGxRNVVDAEKLRKI-xxxVYSVGKPLDPWIKDL
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
