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UniGene Name: sp_v3.0_unigene65737
Length: 185 nt
 UniGene Fasta
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| >sp_v3.0_unigene65737
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Ace file of the UniGene sp_v3.0_unigene65737
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | methionine synthase 2 enzyme [Hordeum vulgare subsp. vulgare] dbj|BAJ96070.1| predicted protein [Hordeum vulgare subsp. vulgare] | - | - | 7.0e-12 | 83% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 90% |
| Sma3 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase | - | - | 1.756e-19 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase. | EC:2.1.1.14 | - | 4.546e-29 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Cysteine and methionine metabolism | 00270 | 4.546e-29 | % | |
| Sma3 | Selenocompound metabolism | 00450 | 4.546e-29 | % | |
| Sma3 | Biosynthesis of plant hormones | 01070 | 4.546e-29 | % | |
| Sma3 | Metabolic pathways | 01100 | 4.546e-29 | % | |
| Sma3 | Biosynthesis of secondary metabolites | 01110 | 4.546e-29 | % |
| Source | Gene names |
|---|---|
| Sma3 | At3g03780; At5g17920; CIMS; ER69; GSVIVT00003836001; GSVIVT00017439001; HvMS; LOC_Os12g42884; MET; METE; MPI7.9; MS1; MS2; MS3; MS4; MS5; Os12g0623900; Os12g0624000; OsI_39179; OsI_39180; OsJ_36927; POPTRDRAFT_573959; POPTRDRAFT_679841; POPTRDRAFT_821018; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | peroxisome | GO:0005777 | Cellular Component | 0.0 | - |
| Sma3 | cytosol | GO:0005829 | Cellular Component | 0.0 | - |
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
| Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
| Sma3 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | GO:0003871 | Molecular Function | 0.0 | - |
| Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
| Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
| Sma3 | methionine synthase activity | GO:0008705 | Molecular Function | 0.0 | - |
| Sma3 | methionine biosynthetic process | GO:0009086 | Biological Process | 0.0 | - |
| Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
| Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Methionine synthase, vitamin-B12 independent | IPR002629 | - | 0.0 | - |
| Sma3 | Cobalamin-independent methionine synthase | IPR006276 | - | 0.0 | - |
| Sma3 | Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal | IPR013215 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT5G17920.1 | ATCIMS, ATMETS, ATMS1 Cobalamin-independent synthase family protein chr5:5935771-5939195 FORWARD LENGTH=765 | 6.0e-13 | 80% |
| RefSeq | Arabidopsis thaliana | NP_001078599.1 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Arabidopsis thaliana] | 7.0e-13 | 80% |
| RefSeq | Populus trichocarpa | XP_002325856.1 | vitamin-b12 independent methionine synthase, 5-methyltetrahydropteroyltriglutamate-homocysteine [Populus trichocarpa] | 1.0e-13 | 86% |
| Full-Lengther Next Prediction |
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Fln status: C-terminus
Fln database: coniferopsida.fasta
Fln subject: D5A7T4
Fln msg: Separated hits, possible frame ERROR between 92 and 97, your sequence is shorter than subject: 57 - 766
Fln protein:
A
Protein Length:
58
Fln nts:
T
Fln Alignment:
GFXCM5X02H84DG___ADRISKMLAVARKTNILWVNPDCGLKTRKYxxEVIPALTNVIAAAKLLRAQLASAK
D5A7T4_______________ADRISKMLAVL-ETNILWVNPDCGLKTRKYxxEVVPALTNMVAAAKLLRAQLASAK
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
