SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene65616

Length: 165 nt

UniGene Fasta

>sp_v3.0_unigene65616
GCATCCAACATTAGACTTACCTATCATTGGATTATGATCCTAGCCTTTATGCTCTTTCAACCCATGCTTATGTTGGGAATTAGCATTGGAGTTGCTTTCAATGTTATTTTTGCGGACTGGATGGTGACCATTTTGCTTATCATCTTATTCCTAGGTACATCTACC

Ace file of the UniGene sp_v3.0_unigene65616

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Sma3	Putative uncharacterized protein At2g25740	-	-	3.506e-09	-

Source	Gene names
Sma3	At2g25737; At2g25740; GSVIVT00014063001; GSVIVT00021717001; GSVIVT00024955001; GSVIVT00032470001; GSVIVT00034374001; OSJNBb0085I16.11; Os08g0387200; Os08g0389700; Os09g0344800; OsI_29096; OsI_29108; OsI_30977; OsJ_27163; OsJ_27176; OsJ_28979; P0434E03.23;

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	ATP-dependent peptidase activity	GO:0004176	Molecular Function	-
Sma3	ATP-dependent proteolysis	GO:0006510	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF81	IPR002781	-	0.0	-
Sma3	Peptidase S16, lon N-terminal	IPR003111	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G25737.1	Sulfite exporter TauE/SafE family protein chr2:10977174-10979677 FORWARD LENGTH=476	5.0e-16	84%
RefSeq	Arabidopsis thaliana	NP_850068.1	Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana]	6.0e-16	84%
RefSeq	Populus trichocarpa	XP_002310222.1	predicted protein, partial [Populus trichocarpa]	2.0e-17	89%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LL03

Fln msg: Distance to subject end: 298 aas, your sequence is shorter than subject: 55 - 505

Fln protein: ASNIRLTYHWIMILAFMLFQPMLMLGISIGVAFNVIFADWMVTILLIILFLGTST

Protein Length: 56

Fln nts: GCATCCAACATTAGACTTACCTATCATTGGATTATGATCCTAGCCTTTATGCTCTTTCAACCCATGCTTATGTTGGGAATTAGCATTGGAGTTGCTTTCAATGTTATTTTTGCGGACTGGATGGTGACCATTTTGCTTATCATCTTATTCCTAGGTACATCTACC

Fln Alignment:

GFXCM5X02JHD59___MLFQPMLMLGISIGVAFNVIFADWMVTILLIILFLGTST
B8LL03_______________MLFQPMLMLGISIGVAFNVIFADWMVTVLLIILFLGTST

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain