UniGene Name: sp_v3.0_unigene65411
Length: 192 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
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>sp_v3.0_unigene65411
G |
Ace file of the UniGene sp_v3.0_unigene65411 (antisense) |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Phosphoinositide 3-kinase n=1 Tax=Nicotiana tabacum RepID=Q4QXM0_TOBAC | - | - | 5.0e-16 | 89% |
FL-Next | sp=Phosphatidylinositol 3-kinase VPS34; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 85% |
Sma3 | Phosphatidylinositol 3-kinase | - | - | 1.293e-14 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Phosphatidylinositol 3-kinase. | EC:2.7.1.137 | - | 5.357e-11 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Inositol phosphate metabolism | 00562 | 5.357e-11 | % | |
Sma3 | Metabolic pathways | 01100 | 5.357e-11 | % | |
Sma3 | Phosphatidylinositol signaling system | 04070 | 5.357e-11 | % |
Source | Gene names |
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Sma3 | At1g60490; CHLREDRAFT_196943; F8A5.4; GSVIVT00002733001; MICPUCDRAFT_42284; MICPUN_88102; OSJNBa0024A05.11; OSJNBa0074N12.38; OSTLU_34142; Os05g0180600; Os08g0307400; OsI_28732; OsJ_17344; OsJ_26836; Ot03g01870; P0453H11.6; PHYPADRAFT_182554; PI3K; PI3K1; |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | phosphatidylinositol 3-kinase complex | GO:0005942 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | RNA binding | GO:0003723 | Molecular Function | 0.0 | - |
Sma3 | RNA-directed DNA polymerase activity | GO:0003964 | Molecular Function | 0.0 | - |
Sma3 | inositol or phosphatidylinositol kinase activity | GO:0004428 | Molecular Function | 0.0 | - |
Sma3 | binding | GO:0005488 | Molecular Function | 0.0 | - |
Sma3 | GTP binding | GO:0005525 | Molecular Function | 0.0 | - |
Sma3 | 1-phosphatidylinositol-3-kinase activity | GO:0016303 | Molecular Function | 0.0 | - |
Sma3 | phosphotransferase activity, alcohol group as acceptor | GO:0016773 | Molecular Function | 0.0 | - |
Sma3 | RNA-dependent DNA replication | GO:0006278 | Biological Process | 0.0 | - |
Sma3 | immune response | GO:0006955 | Biological Process | 0.0 | - |
Sma3 | antigen processing and presentation | GO:0019882 | Biological Process | 0.0 | - |
Sma3 | phosphatidylinositol phosphorylation | GO:0046854 | Biological Process | 0.0 | - |
Sma3 | phosphatidylinositol-mediated signaling | GO:0048015 | Biological Process | 0.0 | - |
Sma3 | microgametogenesis | GO:0055046 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | C2 calcium-dependent membrane targeting | IPR000008 | - | 0.0 | - |
Sma3 | Phosphatidylinositol 3-/4-kinase, catalytic domain | IPR000403 | - | 0.0 | - |
Sma3 | Reverse transcriptase | IPR000477 | - | 0.0 | - |
Sma3 | Phosphoinositide 3-kinase, accessory (PIK) domain | IPR001263 | - | 0.0 | - |
Sma3 | Phosphoinositide 3-kinase, C2 | IPR002420 | - | 0.0 | - |
Sma3 | Endonuclease/exonuclease/phosphatase | IPR005135 | - | 0.0 | - |
Sma3 | Small GTPase superfamily, ARF/SAR type | IPR006689 | - | 0.0 | - |
Sma3 | Phosphatidylinositol 3-kinase, Vps34 type | IPR008290 | - | 0.0 | - |
Sma3 | Phosphatidylinositol Kinase | IPR015433 | - | 0.0 | - |
Sma3 | Phosphatidylinositol 3/4-kinase, conserved site | IPR018936 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G60490.1 | ATVPS34, VPS34, PI3K vacuolar protein sorting 34 chr1:22285792-22290190 REVERSE LENGTH=814 | 9.0e-18 | 89% |
RefSeq | Arabidopsis thaliana | NP_176251.1 | phosphatidylinositol 3-kinase VPS34 [Arabidopsis thaliana] | 1.0e-17 | 89% |
RefSeq | Populus trichocarpa | XP_002318628.1 | predicted protein [Populus trichocarpa] | 4.0e-17 | 86% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: P42339
Fln msg: Separated hits, possible frame ERROR between 42 and 45, Distance to subject end: 45 aas, your sequence is shorter than subject: 64 - 814
Fln protein:
D
Protein Length:
65
Fln nts:
G
Fln Alignment:
G5KS2UX02HF5RB___DDGRLFHVDFGYILxQYYGRFKSYCCEAYNILRKSSNLILNLFHLMAGASIPAI
P42339_______________DDGRLFHVDFAFILxQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSTIPDI
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain