SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene65323

Length: 103 nt

UniGene Fasta

>sp_v3.0_unigene65323
GTATGGAGATGTTGTACGAAGGACCTCACGACGATGAGGCAGCCATTGGTATCAAGAACTGTGACCCCAATGCTCCTCTTATGATGTACGTGTCCAAGATGGT

Ace file of the UniGene sp_v3.0_unigene65323

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Translational elongation factor-2 (Fragment) n=1 Tax=Plathemis lydia RepID=D0UNI0_9ODON	-	-	7.0e-12	93%
FL-Next	sp=Elongation factor 2; Beta vulgaris (Sugar beet).	-	-	0.0	66%
Sma3	Elongation factor 2	-	-	1.427e-12	-

Source	Gene names
Sma3	EF2;

Source	GOs	Term	Type	Identity
Sma3	translation elongation factor activity	GO:0003746	Molecular Function	-
Sma3	GTPase activity	GO:0003924	Molecular Function	-
Sma3	GTP binding	GO:0005525	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Protein synthesis factor, GTP-binding	IPR000795	-	-
Sma3	Translation elongation factor EFTu/EF1A, domain 2	IPR004161	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Ribosomal protein S5 domain 2-type fold, subgroup	IPR014721	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O23755

Fln msg: Distance to subject end: 459 aas, your sequence is shorter than subject: 33 - 843

Fln protein: MEMLYEGPHDDEAAIGIKNCDPNAPLMMYVSKM

Protein Length: 34

Fln nts: GTATGGAGATGTTGTACGAAGGACCTCACGACGATGAGGCAGCCATTGGTATCAAGAACTGTGACCCCAATGCTCCTCTTATGATGTACGTGTCCAAGATGGT

Fln Alignment:

G5KS2UX02HFP99___MEMLYEGPHDDEAAIGIKNCDPNAPLMMYVSKM
O23755_______________VENLYEGPMDDVYATAIRNCDPEGPLMLYVSKM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain