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UniGene Name: sp_v3.0_unigene65031
Length: 236 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene65031
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Ace file of the UniGene sp_v3.0_unigene65031 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY emb|CAA76834.1| SPINDLY protein [Petunia x hybrida] | - | - | 5.0e-35 | 90% |
| FL-Next | sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). | - | - | 0.0 | 90% |
| Sma3 | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY | - | - | 2.285e-24 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Transferases, Glycosyltransferases, Hexosyltransferases. | EC:2.4.1.- | - | 3.222e-14 | - |
| Source | Gene names |
|---|---|
| Sma3 | At3g11540; CHLREDRAFT_117813; F24K9.29; GSVIVT00021566001; OGT1; Os08g0559300; OsI_30264; OsJ_28275; PHYPADRAFT_151814; PHYPADRAFT_200715; POPTRDRAFT_1103631; POPTRDRAFT_867143; RCOM_1259290; SPY; VITISV_025331; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | binding | GO:0005488 | Molecular Function | 0.0 | - |
| Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
| Sma3 | protein N-acetylglucosaminyltransferase activity | GO:0016262 | Molecular Function | 0.0 | - |
| Sma3 | transferase activity | GO:0016740 | Molecular Function | 0.0 | - |
| Sma3 | transferase activity, transferring glycosyl groups | GO:0016757 | Molecular Function | 0.0 | - |
| Sma3 | cytokinin mediated signaling pathway | GO:0009736 | Biological Process | 0.0 | - |
| Sma3 | gibberellic acid mediated signaling pathway | GO:0009740 | Biological Process | 0.0 | - |
| Sma3 | flower development | GO:0009908 | Biological Process | 0.0 | - |
| Sma3 | negative regulation of gibberellic acid mediated signaling pathway | GO:0009938 | Biological Process | 0.0 | - |
| Sma3 | cell differentiation | GO:0030154 | Biological Process | 0.0 | - |
| Sma3 | rhythmic process | GO:0048511 | Biological Process | 0.0 | - |
| Sma3 | regulation of oxygen and reactive oxygen species metabolic process | GO:0080010 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Tetratricopeptide TPR-1 | IPR001440 | - | 0.0 | - |
| Sma3 | Sel1-like | IPR006597 | - | 0.0 | - |
| Sma3 | Tetratricopeptide-like helical | IPR011990 | - | 0.0 | - |
| Sma3 | Tetratricopeptide repeat-containing domain | IPR013026 | - | 0.0 | - |
| Sma3 | Tetratricopeptide repeat | IPR019734 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT3G11540.1 | SPY Tetratricopeptide repeat (TPR)-like superfamily protein chr3:3632842-3637547 FORWARD LENGTH=914 | 3.00018e-42 | 89% |
| RefSeq | Arabidopsis thaliana | NP_187761.1 | putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Arabidopsis thaliana] | 3.00018e-42 | 89% |
| RefSeq | Populus trichocarpa | XP_002308458.1 | predicted protein [Populus trichocarpa] | 9.99967e-42 | 88% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q8RVB2
Fln msg: Distance to subject end: 594 aas, your sequence is shorter than subject: 78 - 931
Fln protein:
A
Protein Length:
79
Fln nts:
T
Fln Alignment:
G5KS2UX02H3D0D___AKNNMAIALTDLGTKVKLEGDIHQGIAHYKKALLYNWHYADAMYNLGVAYGELLKFDMAIVMYELALHFNPHCAEA
Q8RVB2_______________AKNNMAIALTDLGTKVKLEGDINQGVAYYKKALCYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEA
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
