SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene64910

Length: 80 nt

UniGene Fasta

>sp_v3.0_unigene64910
TCCGTGCAATGGGTACATCGTGCATCACAATATCTCACAGGCCTGCCCTTGTGGCATTTCATGACACTGTTCTATCTCTA

Ace file of the UniGene sp_v3.0_unigene64910

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8R2U3_SELML	-	-	2.0e-06	96%
FL-Next	sp=ABC transporter D family member 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	96%

Source	Gene names
Sma3	AT4g39850; At4g39850; COMATOSE; GSVIVT00012868001; OSJNBa0068N01.7; Os05g0107600; OsI_18139; OsJ_16830; PED3; PHYPADRAFT_106885; PHYPADRAFT_218012; RCOM_1662980; T5J17.20; VITISV_025957; ppabcd5; ppabcd6;

Source	GOs	Term	Type	Identity
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	ATPase activity, coupled to transmembrane movement of substances	GO:0042626	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ABC transporter, N-terminal	IPR010509	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	ABC transporter, integral membrane type 1	IPR017940	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q94FB9

Fln msg: Distance to subject end: 687 aas, your sequence is shorter than subject: 26 - 1337

Fln protein: RAMGTSCITISHRPALVAFHDTVLSL

Protein Length: 27

Fln nts: TCCGTGCAATGGGTACATCGTGCATCACAATATCTCACAGGCCTGCCCTTGTGGCATTTCATGACACTGTTCTATCTCTA

Fln Alignment:

G5KS2UX02H8CDF___RAMGTSCITISHRPALVAFHDTVLSL
Q94FB9_______________RAMGTSCITISHRPALVAFHDVVLSL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain