SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene64795

Length: 142 nt

UniGene Fasta

>sp_v3.0_unigene64795
AATGTATGCTCCGTCGTATGTATGAAACAGTTTTTCTAAGAGCCATTTCTCAATGCGACAACAATGGGAGGCGACAATGGGAATGACTTGGGCTCTAATCCTTTTGCTGCTCTGTTTGGACAAGGGCCAGGCCAGGCTAGAG

Ace file of the UniGene sp_v3.0_unigene64795

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	80%

Source	Gene names
Sma3	POPTRDRAFT_741844; VITISV_002886;

Source	GOs	Term	Type	e value	Identity
Sma3	protein modification process	GO:0006464	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Ubiquitin-associated/translation elongation factor EF1B, N-terminal	IPR000449	-	-
Sma3	Ubiquitin	IPR000626	-	-
Sma3	Heat shock chaperonin-binding	IPR006636	-	-
Sma3	Ubiquilin	IPR015496	-	-
Sma3	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote	IPR015940	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5C076

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 249 aas, your sequence is shorter than subject: 47 - 566

Fln protein: NVCSVVCMKQFF*EPFLNATTMGGDNGNDLGSNPFAALFGQGPGQAR

Protein Length: 48

Fln nts: AATGTATGCTCCGTCGTATGTATGAAACAGTTTTTCTAAGAGCCATTTCTCAATGCGACAACAATGGGAGGCGACAATGGGAATGACTTGGGCTCTAATCCTTTTGCTGCTCTGTTTGGACAAGGGCCAGGCCAGGCTAGAG

Fln Alignment:

G5KS2UX02HNC11___EPFLNATTMGGDNGNDLGSNPFAALFG-QGPGQAR
A5C076_______________EPFLNATTMSGDSGNTLGSNPFAALLGNQGGAQAR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain