SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene64535

Length: 170 nt

UniGene Fasta

>sp_v3.0_unigene64535
AATGTTCCTCGAGGAAGCTGAGTCTCGAGCTGTTCATGCAAATGAGCCAATTCCAAAGGTGACTCTAGAGCATGTGACAAATGGAAAAGAATCGAATAAACAAGGATGGAGAAATCATTATGTCATCCACCAAAAGTCGGACCCAAAAGGGAAATATTGAGGATGCTTTG

Ace file of the UniGene sp_v3.0_unigene64535

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	65%

Source	Gene names
Sma3	At1g62855; GSVIVT00007252001; GSVIVT00010320001; LOC_Os03g14510; Os03g0249200; OsI_10760; OsJ_10143; POPTRDRAFT_646490; POPTRDRAFT_671184; RCOM_1680630; RCOM_2106210;

Source	GOs	Term	Type	e value	Identity
Sma3	translation release factor activity	GO:0003747	Molecular Function	0.0	-
Sma3	translational termination	GO:0006415	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptide chain release factor class I/class II	IPR000352	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G62850.2	Class I peptide chain release factor chr1:23272608-23274211 REVERSE LENGTH=236	9.0e-11	82%
RefSeq	Populus trichocarpa	XP_002304436.1	predicted protein [Populus trichocarpa]	2.0e-12	87%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NMX9

Fln msg: ERROR#3, very serious frame error, Warning!, your query overlaps and the subject is separated, Distance to subject end: 57 aas, your sequence is shorter than subject: 57 - 237

Fln protein: MFLEEAESRAVHANEPIPKVTLEHVxxxxxxxxxxxxxxxxxxxxxxxQKGNIEDAL

Protein Length: 58

Fln nts: AATGTTCCTCGAGGAAGCTGAGTCTCGAGCTGTTCATGCAAATGAGCCAATTCCAAAGGTGACTCTAGAGCATGTGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAAAGGGAAATATTGAGGATGCTTTG

Fln Alignment:

G5KS2UX02F8QX3___LEEAESRAVHANEPIPKVTLEHVTNG-KESNKQGWRNHYVIHQKSDxxxxxxxxxxxxxxxxxxxxQMEKNRINKDGEIIMSSTKSRTQKGNIEDAL
A9NMX9_______________LEEAESRAVHANEPIPKVTLEHVTVGFARSGGPGGQNVNKVNTKVDxxxxxxxxxxxxxxxxxxxxQMEKNRINRDGEIVMSSTKSRTQKGNIEDAL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain