SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene64149

Length: 189 nt

UniGene Fasta

>sp_v3.0_unigene64149
AATGTAAGCAGGTCCACCAAGTTTAGGATCTCAAGTGGAGGGTGCATTTATTCCTAGAAATAATATTGAAGAAGCAATACTCTTGTTGTTTATCCTCCTTAAAAATTTTGCACTCAAAAAGATTCCTTGGGATCCTACAATCATGGATCACCTTACTTTTGCCTTGTCAATGTCAGGACAGTTTGAAAC

Ace file of the UniGene sp_v3.0_unigene64149

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Calmodulin-binding protein MPCBP n=2 Tax=Andropogoneae RepID=B6U2D5_MAIZE	-	-	8.0e-06	43%
FL-Next	tr=Calmodulin-binding protein MPCBP; Zea mays (Maize).	-	-	0.0	68%
Sma3	TPR Domain containing protein, expressed	-	-	3.274e-09	-

Source	Gene names
Sma3	AT4g28600; At2g43040; At4g28600; GSVIVT00014960001; GSVIVT00020311001; GSVIVT00028547001; GSVIVT00032350001; GSVIVT00032383001; LOC_Os03g04500; LOC_Os03g10350; LOC_Os10g33290; LOC_Os11g46230; LOC_Os12g37780; NPG; Os03g0138000; Os03g0200600; Os10g0471400;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	calmodulin binding	GO:0005516	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Tetratricopeptide TPR-1	IPR001440	-	-
Sma3	SPOUT methyltransferase, predicted	IPR003742	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	-
Sma3	Tetratricopeptide TPR2	IPR013105	-	-
Sma3	Tetratricopeptide repeat	IPR019734	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B6U2D5

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 407 aas, your sequence is shorter than subject: 62 - 714

Fln protein: M*AGPPSLGSQVEGAFIPRNNIEEAILLLFILLKNFALKKIPWDPTIMDHLTFALSMSGQFE

Protein Length: 63

Fln nts: AATGTAAGCAGGTCCACCAAGTTTAGGATCTCAAGTGGAGGGTGCATTTATTCCTAGAAATAATATTGAAGAAGCAATACTCTTGTTGTTTATCCTCCTTAAAAATTTTGCACTCAAAAAGATTCCTTGGGATCCTACAATCATGGATCACCTTACTTTTGCCTTGTCAATGTCAGGACAGTTTGAAAC

Fln Alignment:

G5KS2UX02IU251___AGPPSLGSQVEGAFIPRXXXXXXXXXXXXXXXXXXXXXXPWDPTIMDHLTFALSMSGQ
B6U2D5_______________AAPPSLASQTEGSFVPRNNLEEAILLLMILLKKWFLGKTHWDPSVMEHLTFALSLCGQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain