UniGene Name: sp_v3.0_unigene63873
Length: 90 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
---|
>sp_v3.0_unigene63873
A |
Ace file of the UniGene sp_v3.0_unigene63873 (antisense) |
---|
If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
Annotations |
---|
Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Alcohol dehydrogenase (Fragment) n=1 Tax=Pinus banksiana RepID=Q43300_PINBN | - | - | 1.0e-08 | 89% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 86% |
Sma3 | Alcohol dehydrogenase | - | - | 7.085e-19 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Alcohol dehydrogenase. | EC:1.1.1.1 | - | 9.532e-32 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Glycolysis / Gluconeogenesis | 00010 | 9.532e-32 | % | |
Sma3 | Fatty acid metabolism | 00071 | 9.532e-32 | % | |
Sma3 | Glycine, serine and threonine metabolism | 00260 | 9.532e-32 | % | |
Sma3 | Tyrosine metabolism | 00350 | 9.532e-32 | % | |
Sma3 | Chloroalkane and chloroalkene degradation | 00625 | 9.532e-32 | % | |
Sma3 | Naphthalene degradation | 00626 | 9.532e-32 | % | |
Sma3 | Retinol metabolism | 00830 | 9.532e-32 | % | |
Sma3 | Metabolism of xenobiotics by cytochrome P450 | 00980 | 9.532e-32 | % | |
Sma3 | Drug metabolism - cytochrome P450 | 00982 | 9.532e-32 | % | |
Sma3 | Metabolic pathways | 01100 | 9.532e-32 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 9.532e-32 | % |
Source | Gene names |
---|---|
Sma3 | ADH; ADH1; ADH2; ADH6; Adh; Adh-2; Adh1B; Adh2; AdhC2; AdhC3; AdhC4; AdhC5; AdhC6; AdhC7; AdhD; AdhE; At1g77120; F22K20.19; GSVIVT00034830001; GSVIVT00034832001; GSVIVT00034834001; POPTRDRAFT_562436; POPTRDRAFT_816232; Sfadh1; VITISV_006227; VITISV_039578 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | alcohol dehydrogenase (NAD) activity | GO:0004022 | Molecular Function | 0.0 | - |
Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | response to hypoxia | GO:0001666 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Alcohol dehydrogenase superfamily, zinc-type | IPR002085 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase, zinc-type, conserved site | IPR002328 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase, C-terminal | IPR013149 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase GroES-like | IPR013154 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT1G77120.1 | ADH1, ADH, ATADH, ATADH1 alcohol dehydrogenase 1 chr1:28975509-28977216 FORWARD LENGTH=379 | 4.0e-11 | 82% |
RefSeq | Arabidopsis thaliana | NP_177837.1 | alcohol dehydrogenase class-P [Arabidopsis thaliana] | 5.0e-11 | 82% |
RefSeq | Populus trichocarpa | XP_002302195.1 | predicted protein [Populus trichocarpa] | 5.0e-12 | 79% |
Full-Lengther Next Prediction |
---|
Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NUJ4
Fln msg: Distance to subject end: 252 aas, your sequence is shorter than subject: 29 - 464
Fln protein:
C
Protein Length:
30
Fln nts:
A
Fln Alignment:
G5KS2UX02JH4WT___CGRCRHCKSEESNMCDLLRVSTERGVMIS
A9NUJ4_______________CGECRHCKSEESNMCDLLRINTERGVMIN
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain