SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63829

Length: 178 nt

UniGene Fasta

>sp_v3.0_unigene63829
AATGTAGGCATGCAGTCCATGGCCAGAAGCGATGACTCTTTTGAGGGACACACCAGGGCAAGCAGTATGTTGGAGGCATCATGAAGATTGGAGGTTGGATCACAAGTGCAAGGATCGGACAAGTAACATAAAGGAAGCTTTTCATCGGCTGCCAATTCCATACTCAATGGAAGACTTC

Ace file of the UniGene sp_v3.0_unigene63829

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	histone-lysine N-methyltransferase ASHR3 [Arabidopsis thaliana] sp\|Q949T8.1\|ASHR3_ARATH RecName: Full=Histone-lysine N-methyltransferase ASHR3; AltName: Full=ASH1-related protein 3; AltName: Full=Protein SET DOMAIN GROUP 4; AltName: Full=Protein stamen lo	-	-	4.0e-10	52%
FL-Next	sp=Histone-lysine N-methyltransferase ASHR3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	52%

Source	Gene names
Sma3	GSVIVT00017128001;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	histone-lysine N-methyltransferase activity	GO:0018024	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	SET domain	IPR001214	-	-
Sma3	Zinc finger, PHD-type	IPR001965	-	-
Sma3	Post-SET domain	IPR003616	-	-
Sma3	AWS	IPR006560	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G30860.1	ASHR3, SDG4 SET domain group 4 chr4:15024546-15027427 FORWARD LENGTH=497	2.0e-14	52%
RefSeq	Arabidopsis thaliana	NP_567859.1	histone-lysine N-methyltransferase ASHR3 [Arabidopsis thaliana]	3.0e-14	52%
RefSeq	Populus trichocarpa	XP_002325110.1	SET domain protein [Populus trichocarpa]	3.0e-14	48%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q949T8

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 251 aas, your sequence is shorter than subject: 59 - 497

Fln protein: M*ACSPWPEAMTLLRDTPGQAVCWRHHEDWRLDHKCKDRTSNIKEAFHRLPIPYSMEDF

Protein Length: 60

Fln nts: AATGTAGGCATGCAGTCCATGGCCAGAAGCGATGACTCTTTTGAGGGACACACCAGGGCAAGCAGTATGTTGGAGGCATCATGAAGATTGGAGGTTGGATCACAAGTGCAAGGATCGGACAAGTAACATAAAGGAAGCTTTTCATCGGCTGCCAATTCCATACTCAATGGAAGACTTC

Fln Alignment:

G5KS2UX02GAO7A___SPWPEAMTLLRDTPGQAVCWRHHEDWRLDHKCKDRTSNIKEAFHRLPIPYSMEDF
Q949T8_______________SPWSKEILHLKDQPGRAVCWRHPTDWRLDTKHAVAQSEIEEVFCQLPLPYVEEEF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain