SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63769

Length: 245 nt

UniGene Fasta

>sp_v3.0_unigene63769
AATGTAACATTGTCATCAATTGCCACTGTCAAACAGGTCGAATGGACTATGCATTCAAACTGTTTGAAGAAATGAAAGCAGAAGGGTATGTTCCAAATGTCATAACCTTCAATACCCTCATCAAAGCGCTTTGCAGTGAGAGCAGAATAGGCGATGCCGCCAACCTTTTTAATCAAATGGTGGGCGAGCAACAGGTTCCAGATGTTGTTATGTATACTACCCTCTTAAATGGTCTCTGCAAGGTA

Ace file of the UniGene sp_v3.0_unigene63769

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pentatricopeptide repeat protein [Raphanus sativus]	-	-	5.0e-13	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	36%

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002328386.1	predicted protein [Populus trichocarpa]	5.0e-19	45%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AAH0

Fln msg: Distance to subject end: 165 aas, your sequence is shorter than subject: 81 - 486

Fln protein: CNIVINCHCQTGRMDYAFKLFEEMKAEGYVPNVITFNTLIKALCSESRIGDAANLFNQMVGEQQVPDVVMYTTLLNGLCKV

Protein Length: 82

Fln nts: AATGTAACATTGTCATCAATTGCCACTGTCAAACAGGTCGAATGGACTATGCATTCAAACTGTTTGAAGAAATGAAAGCAGAAGGGTATGTTCCAAATGTCATAACCTTCAATACCCTCATCAAAGCGCTTTGCAGTGAGAGCAGAATAGGCGATGCCGCCAACCTTTTTAATCAAATGGTGGGCGAGCAACAGGTTCCAGATGTTGTTATGTATACTACCCTCTTAAATGGTCTCTGCAAGGTA

Fln Alignment:

G5KS2UX02JZA3D___NIVINCHCQTGRMDYAFKLFEEMKAEGYVPNVITFNTLIKALCSESRIGDAANLFNQMVGEQQVPDVVMYTTLLNGLCK
D5AAH0_______________NILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain