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UniGene Name: sp_v3.0_unigene63678
Length: 141 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene63678
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Ace file of the UniGene sp_v3.0_unigene63678 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | xanthine dehydrogenase 1 [Arabidopsis thaliana] gb|AAO11781.1| xanthine dehydrogenase 1 [Arabidopsis thaliana] gb|AEE86434.1| xanthine dehydrogenase 1 [Arabidopsis thaliana] | - | - | 1.0e-11 | 73% |
| FL-Next | sp=Xanthine dehydrogenase 1; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 73% |
| Sma3 | Xanthine dehydrogenase | - | - | 5.558e-08 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Transferred entry: 1.17.1.4. | EC:1.1.1.204 | - | 2.779e-08 | - |
| Source | Gene names |
|---|---|
| Sma3 | AT4g34890; AT4g34900; At4g34890; At4g34900; CHLREDRAFT_117669; GSVIVT00024622001; LOC_Os03g31550; MICPUN_83794; OSJNBa0091B22.11; Os03g0429800; OsI_12147; OsJ_11360; POPTRDRAFT_804467; RCOM_1577610; T11I11.130; T11I11.140; VITISV_013055; XDH1; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | xanthine dehydrogenase activity | GO:0004854 | Molecular Function | 0.0 | - |
| Sma3 | xanthine oxidase activity | GO:0004855 | Molecular Function | 0.0 | - |
| Sma3 | iron ion binding | GO:0005506 | Molecular Function | 0.0 | - |
| Sma3 | electron carrier activity | GO:0009055 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
| Sma3 | metal ion binding | GO:0046872 | Molecular Function | 0.0 | - |
| Sma3 | flavin adenine dinucleotide binding | GO:0050660 | Molecular Function | 0.0 | - |
| Sma3 | iron-sulfur cluster binding | GO:0051536 | Molecular Function | 0.0 | - |
| Sma3 | purine base catabolic process | GO:0006145 | Biological Process | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead | IPR000674 | - | 0.0 | - |
| Sma3 | 2Fe-2S ferredoxin-type domain | IPR001041 | - | 0.0 | - |
| Sma3 | Molybdopterin dehydrogenase, FAD-binding | IPR002346 | - | 0.0 | - |
| Sma3 | [2Fe-2S]-binding | IPR002888 | - | 0.0 | - |
| Sma3 | CO dehydrogenase flavoprotein, C-terminal | IPR005107 | - | 0.0 | - |
| Sma3 | 2Fe-2S ferredoxin, iron-sulphur binding site | IPR006058 | - | 0.0 | - |
| Sma3 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding | IPR008274 | - | 0.0 | - |
| Sma3 | Beta-grasp domain | IPR012675 | - | 0.0 | - |
| Sma3 | Xanthine dehydrogenase, small subunit | IPR014307 | - | 0.0 | - |
| Sma3 | FAD-binding, type 2 | IPR016166 | - | 0.0 | - |
| Sma3 | FAD-binding, type 2, subdomain 1 | IPR016167 | - | 0.0 | - |
| Sma3 | CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 | IPR016169 | - | 0.0 | - |
| Sma3 | Aldehyde oxidase/xanthine dehydrogenase | IPR016208 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT4G34890.1 | ATXDH1, XDH1 xanthine dehydrogenase 1 chr4:16618736-16624983 REVERSE LENGTH=1361 | 4.0e-16 | 73% |
| RefSeq | Arabidopsis thaliana | NP_195215.2 | xanthine dehydrogenase 1 [Arabidopsis thaliana] | 5.0e-16 | 73% |
| RefSeq | Populus trichocarpa | XP_002314067.1 | xanthine dehydrogenase [Populus trichocarpa] | 1.0e-15 | 71% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q8GUQ8
Fln msg: Distance to subject end: 651 aas, your sequence is shorter than subject: 46 - 1361
Fln protein:
D
Protein Length:
47
Fln nts:
A
Fln Alignment:
G5KS2UX02I52QI___DVPGGNDIGPTVNDEELFASELVTCVGQVIGIVVADTYENAKIAS
Q8GUQ8_______________DIPGDNMIGPIVPDEELFATDVVTCVGQVIGVVVADTHENAKTAA
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
