SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63526

Length: 254 nt

UniGene Fasta

>sp_v3.0_unigene63526
AATGTCTGTGAGTATGGTTCTGGCATCACGTGGGGTTTCTCCAACCAATGCACTGATATGGAGTGTCATTACGTCCTTGCCACAGTGATAAGCGCTCTAGGTTTGGTGTGGCAAAGTTGAAGCAAATGTCTTTTGAGTCTGTGGTGATGGCCTCTGGTGGCTGTTCCAGCATTCATATGCGCTGAAGCCTTCCACAAATTCTTGCCATTCTGCATGGGTTTTGCAGCTGGCTGTATGATATGGATGGTAATTGC

Ace file of the UniGene sp_v3.0_unigene63526

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ZIP metal ion transporter-like protein [Arabidopsis thaliana] sp\|Q9C9Z1.2\|ZTP50_ARATH RecName: Full=Putative zinc transporter At3g08650 gb\|AEE74659.1\| ZIP metal ion transporter-like protein [Arabidopsis thaliana]	-	-	5.0e-20	88%
FL-Next	sp=Putative zinc transporter At3g08650; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	78%
Sma3	ZIP transporter	-	-	1.135e-07	-

Source	Gene names
Sma3	At3g08650; GSVIVT00033649001; OSJNBa0065C11.1; Os05g0316100; OsI_19433; OsJ_18031; PHYPADRAFT_203300; POPTRDRAFT_577221; POPTRDRAFT_589614; RCOM_0126280; VITISV_036615;

Source	GOs	Term	Type	Identity
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	metal ion transmembrane transporter activity	GO:0046873	Molecular Function	-
Sma3	metal ion transport	GO:0030001	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Zinc/iron permease	IPR003689	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G08650.2	ZIP metal ion transporter family chr3:2624694-2627308 REVERSE LENGTH=619	3.0e-22	88%
RefSeq	Arabidopsis thaliana	NP_974256.1	ZIP metal ion transporter-like protein [Arabidopsis thaliana]	4.0e-22	88%
RefSeq	Populus trichocarpa	XP_002326428.1	ZIP transporter [Populus trichocarpa]	1.0e-20	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9C9Z1

Fln msg: Separated hits, possible frame ERROR between 85 and 151, Distance to subject end: 312 aas, your sequence is shorter than subject: 84 - 619

Fln protein: MSVSMVLASRGVSPTNALIWSVITSLPxxxxxxxxxxxxxxxxxxxxxxxPLVAVPAFICAEAFHKFLPFCMGFAAGCMIWMVI

Protein Length: 85

Fln nts: AATGTCTGTGAGTATGGTTCTGGCATCACGTGGGGTTTCTCCAACCAATGCACTGATATGGAGTGTCATTACGTCCTTGCCACAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCTCTGGTGGCTGTTCCAGCATTCATATGCGCTGAAGCCTTCCACAAATTCTTGCCATTCTGCATGGGTTTTGCAGCTGGCTGTATGATATGGATGGTAATTGC

Fln Alignment:

G5KS2UX02JPC8S___MSVSMVLASRGVSPTNALIWSVITSLPQxxxxxxxxxxxxxxxxxxxxxxPLVAVPAFICAEAFHKFLPFCMGFAAGCMIWMVI
Q9C9Z1_______________LAVSMVLASRGVSPQNAMLWSIITSLPQxxxxxxxxxxxxxxxxxxxxxxPLVAVPAFLCADAFSKFLPFCTGFAAGCMIWMVI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain