SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63374

Length: 234 nt

UniGene Fasta

>sp_v3.0_unigene63374
AATGTAGTATTCTCAAGAAATGAAGTGTGAGCACTTCAGATTGGACCTGGTGGATTATTTTTCACTGGTGATGGAATGGGCGAACTTAAAGTATGGAAATGGGCTACCCAGACACCTTGAGAGGCTGAGATGGCCTATAAATTCATGTTGTAATCAACGACCTCAAAGTTGAAATGCTATTGTGGAGCTTTTGCTCTAAGCATCAGTCTCAAGTTGCAAAGCTACTATGGTCAC

Ace file of the UniGene sp_v3.0_unigene63374

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Zinc finger CCCH domain-containing protein 63 n=3 Tax=Arabidopsis RepID=C3H63_ARATH	-	-	7.0e-08	62%
FL-Next	Isoform 2 of Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis thaliana GN=ZFWD2	-	-	0.0	62%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G51980.2	Transducin/WD40 repeat-like superfamily protein chr5:21113650-21115902 REVERSE LENGTH=443	8.0e-12	62%
RefSeq	Arabidopsis thaliana	NP_200011.1	zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana]	1.0e-11	62%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q9FNZ1-2

Fln msg: your sequence is shorter than subject: 40 - 437

Fln protein: NVVFSRNEV*ALQIGPGGLFFTGDGMGELKVWKWATQTP*

Protein Length: 41

Fln nts: AATGTAGTATTCTCAAGAAATGAAGTGTGAGCACTTCAGATTGGACCTGGTGGATTATTTTTCACTGGTGATGGAATGGGCGAACTTAAAGTATGGAAATGGGCTACCCAGACACCTTGA___GAGGCTGAGATGGCCTATAAATTCATGTTGTAATCAACGACCTCAAAGTTGAAATGCTATTGTGGAGCTTTTGCTCTAAGCATCAGTCTCAAGTTGCAAAGCTACTATGGTCAC

Fln Alignment:

G5KS2UX02IPGI4___VFSRNEV*ALQIGPGGLFFTGDGMGELKVWKWATQ
Q9FNZ1-2_____________IFAKQEIRAIQIGPGGIFFTGDGTGQVKVWKWCTE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain