SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63256

Length: 232 nt

UniGene Fasta

>sp_v3.0_unigene63256
AATGTCTCTTGTTTTAACTTATCACAATGGTCCCCTCCTCACCACGTAGGCCCATTGTGGATGTCCATGTGATTTGGTATGGCAGATTCAGCCCTGCTCAGCGTTCCATTGTGGCGGATTTTGTGCAGTCCTTGGGAGTCCAGCAAAGGCCAAAGAGCCGTCTGTGTATAGCTGGTGGAAAACCNCGGAAAGATACAGTGGTGCATTTAACAAGTCCGCCGCCATGGCAACC

Ace file of the UniGene sp_v3.0_unigene63256

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phi_1 domain containing protein	-	-	4.0e-10	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphate-induced protein 1	IPR006766	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NLQ8

Fln msg: Distance to subject end: 207 aas, your sequence is shorter than subject: 77 - 320

Fln protein: MSLVLTYHNGPLLTT*AHCGCPCDLVWQIQPCSAFHCGGFCAVLGSPAKAKEPSVYSWWKTTERYSGAFNKSAAMAT

Protein Length: 78

Fln nts: AATGTCTCTTGTTTTAACTTATCACAATGGTCCCCTCCTCACCACGTAGGCCCATTGTGGATGTCCATGTGATTTGGTATGGCAGATTCAGCCCTGCTCAGCGTTCCATTGTGGCGGATTTTGTGCAGTCCTTGGGAGTCCAGCAAAGGCCAAAGAGCCGTCTGTGTATAGCTGGTGGAAAACCaCGGAAAGATACAGTGGTGCATTTAACAAGTCCGCCGCCATGGCAACC

Fln Alignment:

G5KS2UX02JBJFD___LVLTYHNGPLLTT*AHCGCPCDLVW--QIQPCSAFHCGGFCAVLGSPAKAKEPSVYSWWKTTERYSGAFNKSAAMA
A9NLQ8_______________LVLTYHNGPLLTTIPTVDV--HLIWYGRFSPAQRSIVGDFVQSLEA-SKATEPSVYSWWKTTERYSGASNNAAAMA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain