SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63062

Length: 118 nt

UniGene Fasta

>sp_v3.0_unigene63062
TGGACTTGCTCTGTGTAAGTCCTTGGCTCTACGTTTAGGAGGATTTGCAGATGCTCACATTGATGAGCGCTCTGCAGCTGGTTTTAGTATGATGATAATACCCATTAAGAGACTGCTG

Ace file of the UniGene sp_v3.0_unigene63062

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%

Source	Gene names
Sma3	OSIGBa0131J24.5; OSJNBa0027H09.17; Os04g0129500; OsI_14695; OsJ_13628;

Source	GOs	Term	Type	Identity
Sma3	COPII vesicle coat	GO:0030127	Cellular Component	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	intracellular protein transport	GO:0006886	Biological Process	-
Sma3	ER to Golgi vesicle-mediated transport	GO:0006888	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	von Willebrand factor, type A	IPR002035	-	-
Sma3	Zinc finger, Sec23/Sec24-type	IPR006895	-	-
Sma3	Sec23/Sec24, trunk domain	IPR006896	-	-
Sma3	Sec23/Sec24, helical domain	IPR006900	-	-
Sma3	Gelsolin domain	IPR007123	-	-
Sma3	Sec23/Sec24 beta-sandwich	IPR012990	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PR65

Fln msg: Distance to subject end: 159 aas, your sequence is shorter than subject: 39 - 1055

Fln protein: GLALCKSLALRLGGFADAHIDERSAAGFSMMIIPIKRLL

Protein Length: 40

Fln nts: TGGACTTGCTCTGTGTAAGTCCTTGGCTCTACGTTTAGGAGGATTTGCAGATGCTCACATTGATGAGCGCTCTGCAGCTGGTTTTAGTATGATGATAATACCCATTAAGAGACTGCTG

Fln Alignment:

G5KS2UX02F4WSJ___GLALCKSLALRLGGFADAHIDERSAAGFSMMIIPIKRLL
C0PR65_______________GLALCKSLALR-GGFADAHIDERSAAGFNMMIIPIKRLL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain