SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63007

Length: 112 nt

UniGene Fasta

>sp_v3.0_unigene63007
TCGAGCATGGCATGTTCCTGAAGACTTGGTGTCTCTCATGTATGCAGGAAGCATGTAAAGTCCTTATAGGACACCATGATTTTAGCTCCTTCCGAGCTGCAGGATGTCAGGC

Ace file of the UniGene sp_v3.0_unigene63007

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI	-	-	6.0e-09	92%
FL-Next	sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%

Source	Gene names
Sma3	MtrDRAFT_AC140550g32v2; RCOM_0759480;

Source	GOs	Term	Type	Identity
Sma3	pseudouridine synthase activity	GO:0009982	Molecular Function	-
Sma3	pseudouridine synthesis	GO:0001522	Biological Process	-
Sma3	tRNA processing	GO:0008033	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Pseudouridine synthase I, TruA	IPR001406	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AE97

Fln msg: Distance to subject end: 177 aas, your sequence is shorter than subject: 36 - 382

Fln protein: EHGMFLKTWCLSCMQEACKVLIGHHDFSSFRAAGCQ

Protein Length: 37

Fln nts: TCGAGCATGGCATGTTCCTGAAGACTTGGTGTCTCTCATGTATGCAGGAAGCATGTAAAGTCCTTATAGGACACCATGATTTTAGCTCCTTCCGAGCTGCAGGATGTCAGGC

Fln Alignment:

G5KS2UX02GAUOM___LSCMQEACKVLIGHHDFSSFRAAGCQ
D5AE97_______________LSCMQEACKVLVGHHDFSSFRASGCQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain