SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene62873

Length: 248 nt

UniGene Fasta

>sp_v3.0_unigene62873
AATGTCCATAGCATTGATCAAGTTTGGATTCCAGTTCTACTCTCTGGATTGGACTGTATCCTACATGCTCAGACTGGATCGGGAAAGACGCTTTTGTAGAAGCAGGGCTTGTGCTGGAGAAGGATTCTAGGAGCCCTTTGAAGTTACATGCAACGGTGATGAATACCAGTCATAGAAAATGAAAAAGTTCCAAAGAAACAAGAGGAATGTTCCCTTTGATGCTCGGCCCATATTAGAGCGTTATGGTC

Ace file of the UniGene sp_v3.0_unigene62873

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RQI1_RICCO	-	-	5.0e-06	60%
FL-Next	tr=Nucleic acid binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	60%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RQI1

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 33 aas, your sequence is shorter than subject: 60 - 416

Fln protein: CP*H*SSLDSSSTLWIGLYPTCSDWIGKDAFVEAGLVLEKDSRSPLKLHATVMNTSHRK*

Protein Length: 61

Fln nts: AATGTCCATAGCATTGATCAAGTTTGGATTCCAGTTCTACTCTCTGGATTGGACTGTATCCTACATGCTCAGACTGGATCGGGAAAGACGCTTTTGTAGAAGCAGGGCTTGTGCTGGAGAAGGATTCTAGGAGCCCTTTGAAGTTACATGCAACGGTGATGAATACCAGTCATAGAAAATGAAAAAGTTCCAAAGAAACAAGAGGAATGTTCCCTTTGATGCTCGGCCCATATTAGAGCGTTATGGTC

Fln Alignment:

G5KS2UX02I8TV0___DAFVEAGLVLEKDSRSPLKLHATVMNTSHRK*KSSK------ETRGMF
B9RQI1_______________DAFVGAGLVLEKDAKQKLKLHATVMNSRHRKGKMRKNKYDSFDARGIF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain