SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene62837

Length: 179 nt

UniGene Fasta

>sp_v3.0_unigene62837
AATGTAATGTTTAATGATGAGGACTTTGAAGTGAACAAATTCTCTCCAGAATATGTTTCTCTGCATCCAAGTGAATCAAAGAAGAAACCATCTTTAGTAGAAGAACACTTTGAACCAGTTGATGATGACAGTGCAGAAGAAGAGGTAGCCGTCGGTGAGACAGACCCTTCAGACTCTGA

Ace file of the UniGene sp_v3.0_unigene62837

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NUC153 domain containing protein	-	-	0.0001	50%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	65%

Source	Gene names
Sma3	GSVIVT00000661001;

Source	GOs	Term	Type	e value	Identity
Sma3	nucleus	GO:0005634	Cellular Component	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	WD40 repeat	IPR001680	-	-
Sma3	NUC153	IPR012580	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7TIN5

Fln msg: Distance to subject end: 138 aas, your sequence is shorter than subject: 59 - 701

Fln protein: NVMFNDEDFEVNKFSPEYVSLHPSESKKKPSLVEEHFEPVDDDSAEEEVAVGETDPSDS

Protein Length: 60

Fln nts: AATGTAATGTTTAATGATGAGGACTTTGAAGTGAACAAATTCTCTCCAGAATATGTTTCTCTGCATCCAAGTGAATCAAAGAAGAAACCATCTTTAGTAGAAGAACACTTTGAACCAGTTGATGATGACAGTGCAGAAGAAGAGGTAGCCGTCGGTGAGACAGACCCTTCAGACTCTGA

Fln Alignment:

G5KS2UX02GFC01___MFNDEDFEVNKFSPEYVSLHPSESKKKPSLVEEHFEPVDDDSAE
D7TIN5_______________MFENKDFEVDELSQEYMSLHPMPSKKQPSLVEEHFEPVMEDIDE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain