SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene62679

Length: 298 nt

UniGene Fasta

>sp_v3.0_unigene62679
AATGTCAAAGAGTCCCTGTTGCGATTAGTAATGGATCAGTTTAAGCCTCTTTCAGAGGCAACGTGGGTTCTGGGAAATTCCTTTTCCGAACTGGAATCGGAAGAAATAAATTCAATGAAATCGCTAGCTCCGATTCGCACTGTCGGTCCTGTCATACCCTCGGCTTTCTTGGACGGACGGAATCCCGAAGATACAGACCCTGGGGCACACTTGTGGAAAACCATGAACTGCATGGATTGGCTGAATACGAAGGAACCCGCAAGCGTCGTGTATGTTTCTTTCGGAAGCCTGGCTGTTC

Ace file of the UniGene sp_v3.0_unigene62679

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum]	-	-	2.0e-18	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Sma3	UDP-glucosyltransferase, putative	-	-	4.048e-06	-

Source	Gene names
Sma3	Os09g0517900; P0217C03.3; POPTRDRAFT_585760; RCOM_0606290; RCOM_0811310; UGT74N1; VITISV_041748;

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002331798.1	predicted protein [Populus trichocarpa]	5.0e-25	53%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKT4

Fln msg: Distance to subject end: 194 aas, your sequence is shorter than subject: 99 - 490

Fln protein: NVKESLLRLVMDQFKPLSEATWVLGNSFSELESEEINSMKSLAPIRTVGPVIPSAFLDGRNPEDTDPGAHLWKTMNCMDWLNTKEPASVVYVSFGSLAV

Protein Length: 100

Fln nts: AATGTCAAAGAGTCCCTGTTGCGATTAGTAATGGATCAGTTTAAGCCTCTTTCAGAGGCAACGTGGGTTCTGGGAAATTCCTTTTCCGAACTGGAATCGGAAGAAATAAATTCAATGAAATCGCTAGCTCCGATTCGCACTGTCGGTCCTGTCATACCCTCGGCTTTCTTGGACGGACGGAATCCCGAAGATACAGACCCTGGGGCACACTTGTGGAAAACCATGAACTGCATGGATTGGCTGAATACGAAGGAACCCGCAAGCGTCGTGTATGTTTCTTTCGGAAGCCTGGCTGTTC

Fln Alignment:

G5KS2UX02IPXD9___NVKESLLRLVMDQFKPLSEATWVLGNSFSELESEEINSMKSLAPIRTVGPVIPSAFLDGRNPEDTDPGAHLWKTMNCMDWLNTKEPASVVYVSFGSLAV
B8LKT4_______________NAYESLLRLVMDQFKPLPEATWVLGNSFSELESEEINSMKSIAPLRTVGPLIPSAFLDGRNPGDTDCGAHLWKTTNCMDWLNTKEPASVVYVSFGSLAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain