SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene62452

Length: 183 nt

UniGene Fasta

>sp_v3.0_unigene62452
AATGTATCTTTATGAGGTGTCGGCATTATAGAATACGTTTGAACCCACACAAATGTGTCTTCTGTATAGAAGTGGGACGATTGCTTGGTTTTGTTGTTTCAAAAGCCGGCATTCGCGTCGACCCCTCGAAGGTAGAGGCTATAGTTAGACTGCCTCCGCCCTCGAGTTTACGCCAACTCCAAA

Ace file of the UniGene sp_v3.0_unigene62452

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR	-	-	1.0e-10	50%
FL-Next	tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	52%

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002336419.1	predicted protein, partial [Populus trichocarpa]	5.0e-15	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: I1KWK1

Fln msg: Distance to subject end: 1042 aas, your sequence is shorter than subject: 60 - 2780

Fln protein: CIFMRCRHYRIRLNPHKCVFCIEVGRLLGFVVSKAGIRVDPSKVEAIVRLPPPSSLRQLQ

Protein Length: 61

Fln nts: AATGTATCTTTATGAGGTGTCGGCATTATAGAATACGTTTGAACCCACACAAATGTGTCTTCTGTATAGAAGTGGGACGATTGCTTGGTTTTGTTGTTTCAAAAGCCGGCATTCGCGTCGACCCCTCGAAGGTAGAGGCTATAGTTAGACTGCCTCCGCCCTCGAGTTTACGCCAACTCCAAA

Fln Alignment:

G5KS2UX02JFGMH___IFMRCRHYRIRLNPHKCVFCIEVGRLLGFVVSKAGIRVDPSKVEAIVRLPPPSSLRQLQ
I1KWK1_______________LFERLRKYQLRLNPAKCTFGVKSGKLLGFIVSQKGIEVDPKKVKVILEMPKPRTKRQVQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain