SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene62000

Length: 223 nt

UniGene Fasta

>sp_v3.0_unigene62000
AATGTAGCAACTGGTTAAAGAGGAAAAAGAAGAACGCCCTGTATGAAGCACTTGAAAAACTGAAAGCAGAATTGATGCTTCTTGGTTTCATCTCACTTCTACTGACAGTCGGAGCGAAGCCCATTTCTATGATTTGTATATCCAAAAACGTAGTTGATACTATGCTTCCGTGTAAGAAAAATGATACTGCCGTTGAAAGCACTGCTGTTGAAAGCATGAAAGT

Ace file of the UniGene sp_v3.0_unigene62000

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam03094, Mlo, Mlo family	-	-	7.0e-26	71%
FL-Next	sp=MLO protein homolog 1; Oryza sativa subsp. japonica (Rice).	-	-	0.0	52%
Sma3	MLO1	-	-	4.919e-11	-

Source	Gene names
Sma3	At1g11310; At1g61560; At2g17430; At2g17480; At2g39200; At4g02600; At4g24250; At5g65970; F5J6.19; F5J6.21; GSVIVT00002911001; GSVIVT00002913001; GSVIVT00011358001; GSVIVT00018217001; GSVIVT00018219001; GSVIVT00023170001; GSVIVT00024506001; GSVIVT0002450700

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	calmodulin binding	GO:0005516	Molecular Function	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	cell death	GO:0008219	Biological Process	-
Sma3	response to biotic stimulus	GO:0009607	Biological Process	-
Sma3	defense response to fungus, incompatible interaction	GO:0009817	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Mlo-related protein	IPR004326	-	0.0	-
Sma3	C-type lectin, conserved site	IPR018378	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q0DC45

Fln msg: Distance to subject end: 427 aas, your sequence is shorter than subject: 73 - 540

Fln protein: CSNWLKRKKKNALYEALEKLKAELMLLGFISLLLTVGAKPISMICISKNVVDTMLPCKKNDTAVESTAVESMK

Protein Length: 74

Fln nts: AATGTAGCAACTGGTTAAAGAGGAAAAAGAAGAACGCCCTGTATGAAGCACTTGAAAAACTGAAAGCAGAATTGATGCTTCTTGGTTTCATCTCACTTCTACTGACAGTCGGAGCGAAGCCCATTTCTATGATTTGTATATCCAAAAACGTAGTTGATACTATGCTTCCGTGTAAGAAAAATGATACTGCCGTTGAAAGCACTGCTGTTGAAAGCATGAAAGT

Fln Alignment:

G5KS2UX02ISL3Z___SNWLKRXXXXXXXXXXXXXXXXXXXXGFISLLLTVGAKPISMICISKNVVDTMLPCKKNDTAVESTAVESMK
Q0DC45_______________SHWFRRRQKKAMGDALDKIKAELMLLGFISLLLTVAQAPISKICIPKSAANILLPCKAGQDAIEEEAASDRR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain