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UniGene Name: sp_v3.0_unigene61830
Length: 204 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene61830
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Ace file of the UniGene sp_v3.0_unigene61830 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | [E] COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain | - | - | 7.0e-12 | 84% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 97% |
| Sma3 | Glycine dehydrogenase [decarboxylating], mitochondrial | - | - | 7.823e-16 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Glycine dehydrogenase (decarboxylating). | EC:1.4.4.2 | - | 2.508e-26 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Glycine, serine and threonine metabolism | 00260 | 2.508e-26 | % | |
| Sma3 | Metabolic pathways | 01100 | 2.508e-26 | % |
| Source | Gene names |
|---|---|
| Sma3 | At2g26080; At4g33010; B1142C05.6-1; CHLREDRAFT_136984; F26P21.130; GCSP; GDC; GDCP; GDCSP; GDCSPA; GDCSPB; GSVIVT00016572001; GSVIVT00032211001; MICPUCDRAFT_24398; MICPUN_104877; OSTLU_26284; Os01g0711400; Os06g0611900; OsI_03474; OsI_23687; OsJ_03218; Os |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
| Sma3 | glycine cleavage complex | GO:0005960 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
| Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
| Sma3 | glycine dehydrogenase (decarboxylating) activity | GO:0004375 | Molecular Function | 0.0 | - |
| Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
| Sma3 | small conjugating protein ligase activity | GO:0019787 | Molecular Function | 0.0 | - |
| Sma3 | pyridoxal phosphate binding | GO:0030170 | Molecular Function | 0.0 | - |
| Sma3 | glycine metabolic process | GO:0006544 | Biological Process | 0.0 | - |
| Sma3 | glycine catabolic process | GO:0006546 | Biological Process | 0.0 | - |
| Sma3 | post-translational protein modification | GO:0043687 | Biological Process | 0.0 | - |
| Sma3 | regulation of protein metabolic process | GO:0051246 | Biological Process | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Ubiquitin-conjugating enzyme, E2 | IPR000608 | - | 0.0 | - |
| Sma3 | Glycine cleavage system P protein, homodimeric | IPR003437 | - | 0.0 | - |
| Sma3 | Pyridoxal phosphate-dependent transferase, major region, subdomain 1 | IPR015421 | - | 0.0 | - |
| Sma3 | Ubiquitin-conjugating enzyme/RWD-like | IPR016135 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT4G33010.1 | AtGLDP1, GLDP1 glycine decarboxylase P-protein 1 chr4:15926852-15931150 REVERSE LENGTH=1037 | 2.0e-19 | 92% |
| RefSeq | Arabidopsis thaliana | NP_001119106.1 | glycine dehydrogenase [decarboxylating] 2 [Arabidopsis thaliana] | 2.0e-19 | 92% |
| RefSeq | Populus trichocarpa | XP_002308562.1 | precursor of carboxylase p-protein 1, glycine decarboxylase complex [Populus trichocarpa] | 4.0e-19 | 94% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: C0PQ48
Fln msg: Distance to subject end: 427 aas, your sequence is shorter than subject: 68 - 780
Fln protein:
M
Protein Length:
69
Fln nts:
A
Fln Alignment:
G5KS2UX02H4HYX___MYHTEHELLRYLHRLQAKDLSLCHSMIPLGSCTMKLNATV
C0PQ48_______________MYHAEHELLRYLHRLQAKDLSLCHSMIPLGSCTMKLNATV
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
