UniGene Name: sp_v3.0_unigene61632
Length: 210 nt
UniGene Fasta |
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>sp_v3.0_unigene61632
A |
Ace file of the UniGene sp_v3.0_unigene61632 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA | - | - | 5.0e-22 | 57% |
FL-Next | sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 63% |
Sma3 | S-adenosylmethionine synthetase | - | - | 3.06e-19 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Methionine adenosyltransferase. | EC:2.5.1.6 | - | 2.151e-30 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Cysteine and methionine metabolism | 00270 | 2.151e-30 | % | |
Sma3 | Biosynthesis of plant hormones | 01070 | 2.151e-30 | % | |
Sma3 | Metabolic pathways | 01100 | 2.151e-30 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 2.151e-30 | % |
Source | Gene names |
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Sma3 | AT4G01850; AdoMet1; AdoMet3; AdoMet4; AdoMet5; AdoMet6; AdoMet_e2; At2g36880; CC2188; GSVIVT00000624001; GSVIVT00022173001; GSVIVT00022531001; GSVIVT00029885001; LOC_Os01g18860; METK; METK-1; METK-2; METK1; METK2; METK3; METK4; METK5; MICPUCDRAFT_49687; M |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | magnesium ion binding | GO:0000287 | Molecular Function | 0.0 | - |
Sma3 | methionine adenosyltransferase activity | GO:0004478 | Molecular Function | 0.0 | - |
Sma3 | enzyme inhibitor activity | GO:0004857 | Molecular Function | 0.0 | - |
Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | pectinesterase activity | GO:0030599 | Molecular Function | 0.0 | - |
Sma3 | potassium ion binding | GO:0030955 | Molecular Function | 0.0 | - |
Sma3 | cobalt ion binding | GO:0050897 | Molecular Function | 0.0 | - |
Sma3 | one-carbon metabolic process | GO:0006730 | Biological Process | 0.0 | - |
Sma3 | lignin biosynthetic process | GO:0009809 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | S-adenosylmethionine synthetase | IPR002133 | - | 0.0 | - |
Sma3 | Pectinesterase inhibitor | IPR006501 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT2G36880.1 | MAT3 methionine adenosyltransferase 3 chr2:15479721-15480893 REVERSE LENGTH=390 | 1.0e-27 | 55% |
RefSeq | Arabidopsis thaliana | NP_001118458.1 | S-adenosylmethionine synthase 3 [Arabidopsis thaliana] | 2.0e-27 | 55% |
RefSeq | Populus trichocarpa | XP_002326202.1 | s-adenosylmethionine synthetase 6 [Populus trichocarpa] | 2.0e-27 | 56% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LNX2
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 178 aas, your sequence is shorter than subject: 67 - 393
Fln protein:
N
Protein Length:
68
Fln nts:
A
Fln Alignment:
G5KS2UX02F45G6___KRPEEIGAGDQGHMFGYATD-----------------------------------GKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAAD
B8LNX2_______________KRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAAD
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain