SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene61563

Length: 218 nt

UniGene Fasta

>sp_v3.0_unigene61563
AATGTAGCTGAGCTTGGATTCACAGCAGAAAGGAGAGAAAATGGTCGGACCACGTCGGCCACTGTTTGTGCTGTTTGGTTCCTCCATTGTGCAGTACAGCTTTGCCAATGGTGGCTGGGGAGCTCATCTTGCTGACATCTATGCACGCAAGGCAGATATTCTGGTACGAGGGTATAGTTCGTGGAACTCCAGGCGGGCACTGCAAGTGTTAGATCAAA

Ace file of the UniGene sp_v3.0_unigene61563

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Sma3	Isoamyl acetate-hydrolyzing esterase, putative	-	-	2.328e-16	-

Source	Gene names
Sma3	At2g38180; At3g11210; CPRD49; F11B9.13; F16M14.11; F9F8.1; GSVIVT00016066001; GSVIVT00021507001; GSVIVT00029278001; LOC_Os10g33690; LOC_Os11g48070; OSJNBa0026O12.11; OSJNBa0038J17.26; Os01g0214200; Os10g0476700; Os11g0708400; OsI_00883; OsJ_00864; OsJ_318

Source	GOs	Term	Type	e value	Identity
Sma3	hydrolase activity, acting on ester bonds	GO:0016788	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 10	IPR001000	-	-
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Lipase, GDSL, active site	IPR008265	-	-
Sma3	Esterase, SGNH hydrolase-type, subgroup	IPR013831	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G11210.1	SGNH hydrolase-type esterase superfamily protein chr3:3511101-3512899 REVERSE LENGTH=256	6.0e-24	71%
RefSeq	Arabidopsis thaliana	NP_566387.1	GDSL esterase/lipase CPRD49 [Arabidopsis thaliana]	7.0e-24	71%
RefSeq	Populus trichocarpa	XP_002322977.1	predicted protein [Populus trichocarpa]	8.0e-28	83%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LNG4

Fln msg: Distance to subject end: 197 aas, your sequence is shorter than subject: 59 - 256

Fln protein: MVGPRRPLFVLFGSSIVQYSFANGGWGAHLADIYARKADILVRGYSSWNSRRALQVLDQ

Protein Length: 60

Fln nts: AATGTAGCTGAGCTTGGATTCACAGCAGAAAGGAGAGAAA_-_ATGGTCGGACCACGTCGGCCACTGTTTGTGCTGTTTGGTTCCTCCATTGTGCAGTACAGCTTTGCCAATGGTGGCTGGGGAGCTCATCTTGCTGACATCTATGCACGCAAGGCAGATATTCTGGTACGAGGGTATAGTTCGTGGAACTCCAGGCGGGCACTGCAAGTGTTAGATCAAA

Fln Alignment:

G5KS2UX02GYY91___MVGPRRPLFVLFGSSIVQYSFANGGWGAHLADIYARKADILVRGYSSWNSRRALQVLDQ
B8LNG4_______________MVGPRRPLFVLFGSSIVQYSFANGGWGAALADIYARKADILVRGYSAWNSRRALQVIDQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain