SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene61439

Length: 228 nt

UniGene Fasta

>sp_v3.0_unigene61439
TCCGAACAGCACGGGGGTGAAGAGGAGAAGAAGGCGGGTCTGCTCGATAAAATCAAAGAGAAACTGCCTGGACACTAGAACAAGGATGGCGGGGAAGAGGGGAGGAAGGGAAGAAGCACCATCATTAAAGATGTTGTAAACATGTGAATCTGTATCTGTTTTTGTTTTTGCTCCTTCACGGCTTTGCTTAGGAGCGTGGATGAGAATAATCGTATGTGCGTGTTGTTT

Ace file of the UniGene sp_v3.0_unigene61439

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Dehydrin 2 (Fragment) n=1 Tax=Pinus ponderosa RepID=B8XQ28_PINPO	-	-	3.0e-07	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Sma3	Dehydrin 2	-	-	3.933e-11	-

Source	Gene names
Sma3	Dhn1; Dhn4; Dhn5; dhn2;

Source	GOs	Term	Type	e value	Identity
Sma3	response to stress	GO:0006950	Biological Process	0.0	-
Sma3	response to water	GO:0009415	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Dehydrin	IPR000167	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P1U6

Fln msg: your sequence is shorter than subject: 26 - 244

Fln protein: SEQHGGEEEKKAGLLDKIKEKLPGH*

Protein Length: 27

Fln nts: TCCGAACAGCACGGGGGTGAAGAGGAGAAGAAGGCGGGTCTGCTCGATAAAATCAAAGAGAAACTGCCTGGACACTAG___AACAAGGATGGCGGGGAAGAGGGGAGGAAGGGAAGAAGCACCATCATTAAAGATGTTGTAAACATGTGAATCTGTATCTGTTTTTGTTTTTGCTCCTTCACGGCTTTGCTTAGGAGCGTGGATGAGAATAATCGTATGTGCGTGTTGTTT

Fln Alignment:

G5KS2UX02I2EVE___SEQHGGEEEKKAGLLDKIKEKLPGH*NKDGGEEGRK
A9P1U6_______________SDQYGGKQEKKMGLLDKIKEKLPGHENKNDGEEEEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain