SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene61408

Length: 126 nt

UniGene Fasta

>sp_v3.0_unigene61408
AATGTCTGAATCTTTATCAAAACAACCTGGTCGGCGAAATACCTCCAGGGCTTGGTTCGTTTGCAAGCCTCAACGAGTTAAAGCTCTTTTCGAATAGATTAACCGGTACTTTACCTGAGAACCTCG

Ace file of the UniGene sp_v3.0_unigene61408

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL	-	-	3.0e-12	90%
FL-Next	tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	90%
Sma3	Clavata-like receptor	-	-	6.335e-06	-

Source	Gene names
Sma3	CLV;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q19AV8

Fln msg: Distance to subject end: 645 aas, your sequence is shorter than subject: 41 - 998

Fln protein: CLNLYQNNLVGEIPPGLGSFASLNELKLFSNRLTGTLPENL

Protein Length: 42

Fln nts: AATGTCTGAATCTTTATCAAAACAACCTGGTCGGCGAAATACCTCCAGGGCTTGGTTCGTTTGCAAGCCTCAACGAGTTAAAGCTCTTTTCGAATAGATTAACCGGTACTTTACCTGAGAACCTCG

Fln Alignment:

G5KS2UX02HBEGA___LNLYQNNLVGEIPPGLGSFASLNELKLFSNRLTGTLPENL
Q19AV8_______________LNLYQNDLVGEIPPGLGSFASLTELKLFSNRLTGRLPESL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain