SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene60837

Length: 188 nt

UniGene Fasta

>sp_v3.0_unigene60837
AATGTCACTAGAGTAGATGAGAGAACTGGAAATACTTGTCAGTTGATGTGGCTGAAATTCTTAGGCGATGGACACATGCTTTACAACGAATTCATAAGCAGTCTGTCAGACTGGCCAGAGCAAGTGATGGAGCAGGTCCACAGCTTTTGAAAAGCACAACAGATTTTGTAGGTAATGGGCATGTTGAA

Ace file of the UniGene sp_v3.0_unigene60837

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	68%
Sma3	Putative uncharacterized protein At5g40740	-	-	7.31e-06	-

Source	Gene names
Sma3	At5g40740; OJ1521_G01.18; Os02g0329300; OsI_07020; OsJ_06518; POPTRDRAFT_815549; RCOM_0530650;

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G40740.1	" unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). chr5:16302229-16306371 REVERSE LENGTH=741"	4.0e-16	64%
RefSeq	Arabidopsis thaliana	NP_568585.1	uncharacterized protein [Arabidopsis thaliana]	5.0e-16	64%
RefSeq	Populus trichocarpa	XP_002300079.1	predicted protein [Populus trichocarpa]	4.0e-15	64%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9SLQ5

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 328 aas, your sequence is shorter than subject: 62 - 708

Fln protein: CH*SR*ENWKYLSVDVAEILRRWTHALQRIHKQSVRLARASDGAGPQLLKSTTDFVGNGHVE

Protein Length: 63

Fln nts: AATGTCACTAGAGTAGATGAGAGAACTGGAAATACTTGTCAGTTGATGTGGCTGAAATTCTTAGGCGATGGACACATGCTTTACAACGAATTCATAAGCAGTCTGTCAGACTGGCCAGAGCAAGTGATGGAGCAGGTCCACAGCTTTTGAAAAGCACAACAGATTTTGTAGGTAATGGGCATGTTGAA

Fln Alignment:

G5KS2UX02JYAWK___SVDVAEILRRWTHALQRIHKQSVRLARASDGAGPQLLKSTTDFVGNGHVE
B9SLQ5_______________TVDVAEIIRRWTHALQRIHKQSLHLAKANDGEGPDLLRSAQDGGSSGHSE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain