SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene60830

Length: 201 nt

UniGene Fasta

>sp_v3.0_unigene60830
AGCACTCGTAGGATCACGCGGCGAACGGCGCTTCATCCGATTTCCTGCCCGAGGGATTTGAGAAGCGAATGACTGAGAAAAAGCAGGGATTGCTCATCAAAGAGTGGGCACCGCAGCTGCTGATTCTCTCCCACCCATCAATCGGAGGGTTCTTTAGCCATTGCGGGTGGAATTCGATTATGGAGAGCATAAGCCAGGGGG

Ace file of the UniGene sp_v3.0_unigene60830

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	triterpene UDP-glucosyl transferase UGT73K1 [Medicago truncatula]	-	-	2.0e-15	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Sma3	UDP-glucosyltransferase, putative	-	-	1.226e-17	-

Source	ECs	Term	Type	e value	Identity
Sma3	Anthocyanidin 3-O-glucosyltransferase.	EC:2.4.1.115	-	3.333e-17	-

Source	KEGGs	Term	e value	Identity
Sma3	Anthocyanin biosynthesis	00942	3.333e-17	%
Sma3	Metabolic pathways	01100	3.333e-17	%
Sma3	Biosynthesis of secondary metabolites	01110	3.333e-17	%

Source	Gene names
Sma3	AdGt-9; AmUGT36; At2g36780; At3g53160; At5g12890; CaUGT2; GSVIVT00024131001; GSVIVT00025630001; GSVIVT00025631001; GSVIVT00033568001; GSVIVT00033569001; GT7; OSJNBa0029B02.15; OSJNBb0056F09.6; Os04g0271700; OsI_18661; OsJ_17321; POPTRDRAFT_1083426; POPTRD

Source	GOs	Term	Type	Identity
Sma3	nuclear pore	GO:0005643	Cellular Component	-
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	response to other organism	GO:0051707	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-
Sma3	Nucleoporin interacting component Nup93/Nic96	IPR007231	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G12890.1	UDP-Glycosyltransferase superfamily protein chr5:4069658-4071124 REVERSE LENGTH=488	3.0e-18	62%
RefSeq	Arabidopsis thaliana	NP_196793.1	UDP-glycosyltransferase-like protein [Arabidopsis thaliana]	3.0e-18	62%
RefSeq	Populus trichocarpa	XP_002333409.1	predicted protein, partial [Populus trichocarpa]	3.0e-22	66%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LPW1

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 89 aas, your sequence is shorter than subject: 66 - 502

Fln protein: HS*DHAANGASSDFLPEGFEKRMTEKKQGLLIKEWAPQLLILSHPSIGGFFSHCGWNSIMESISQG

Protein Length: 67

Fln nts: AGCACTCGTAGGATCACGCGGCGAACGGCGCTTCATCCGATTTCCTGCCCGAGGGATTTGAGAAGCGAATGACTGAGAAAAAGCAGGGATTGCTCATCAAAGAGTGGGCACCGCAGCTGCTGATTCTCTCCCACCCATCAATCGGAGGGTTCTTTAGCCATTGCGGGTGGAATTCGATTATGGAGAGCATAAGCCAGGGGG

Fln Alignment:

F7JJN6E01D70PO___SSDFLPEGFEKRMTEKKQGLLIKEWAPQLLILSHPSIGGFFSHCGWNSIMESISQG
B8LPW1_______________SAEFLPEGFEERVKEHKLGLIIRKWAPQLLILSHPSTGGFLSHCGWNSVLESLSQG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain