SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene60813

Length: 116 nt

UniGene Fasta

>sp_v3.0_unigene60813
AATGTCTCCACAGTGGATTTCAAAGAAAGAGTTTTCCTCATGGATTTGTATTTGGCACCGCCTCCTCAGCGTTCCAGTACGAGGGAGCAGTAAAAGAAGATGGGCGAGGAGCCAGC

Ace file of the UniGene sp_v3.0_unigene60813

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9REF8_RICCO	-	-	8.0e-09	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%

Source	Gene names
Sma3	GSVIVT00030066001; GSVIVT00030067001; LOC_Os03g11420; LOC_Os10g17650; OSJNBa0065C16.15; Os03g0212800; Os10g0323500; OsI_10506; OsI_33062; OsJ_09895; OsJ_31060; POPTRDRAFT_1084811; POPTRDRAFT_226169; RCOM_1621030;

Source	GOs	Term	Type	Identity
Sma3	hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	Molecular Function	-
Sma3	cation binding	GO:0043169	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 1	IPR001360	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Glycoside hydrolase, family 1, active site	IPR018120	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002311330.1	predicted protein [Populus trichocarpa]	2.0e-12	81%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ09

Fln msg: Distance to subject end: 438 aas, your sequence is shorter than subject: 38 - 505

Fln protein: CLHSGFQRKSFPHGFVFGTASSAFQYEGAVKEDGRGAS

Protein Length: 39

Fln nts: AATGTCTCCACAGTGGATTTCAAAGAAAGAGTTTTCCTCATGGATTTGTATTTGGCACCGCCTCCTCAGCGTTCCAGTACGAGGGAGCAGTAAAAGAAGATGGGCGAGGAGCCAGC

Fln Alignment:

G5KS2UX02GHLVX___GFQRKSFPHGFVFGTASSAFQYEGAVKEDGRGAS
B8LQ09_______________GLSRASFPKGFVFGTATSAYQVEGAAKTDGRGPS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain