SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene59204

Length: 159 nt

UniGene Fasta

>sp_v3.0_unigene59204
ATGGGTCACAGAATCTGGAATATTTTGTGTTTTACCTTGGCTTACTATGGCCTTGAGTGCAAATTTGGGAGGATGGATCGCTGACACACTTGTGAACAAGGGAGTATCAATCACAACAGTTCGCAAGGTAAGCTCATTATTTGAATATGAATCAATCTC

Ace file of the UniGene sp_v3.0_unigene59204

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Sodium-dependent phosphate transport protein, putative	-	-	4.0e-13	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%

Source	Gene names
Sma3	ANTR1; ANTR2; A_IG005I10_nn; At2g29650; At4g00370; F5I10.7; GSVIVT00024146001; GSVIVT00026884001; MtrDRAFT_AC161399g10v2; OJ1003_C09.34; OSJNBa0036E02.3; Os01g0279700; Os09g0570400; OsI_01403; OsI_32467; OsJ_01311; OsJ_30419; P0003H10.9; PHYPADRAFT_206025

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	plastid inner membrane	GO:0009528	Cellular Component	-
Sma3	thylakoid	GO:0009579	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	inorganic phosphate transmembrane transporter activity	GO:0005315	Molecular Function	-
Sma3	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	-
Sma3	symporter activity	GO:0015293	Molecular Function	-
Sma3	inorganic diphosphate transmembrane transporter activity	GO:0030504	Molecular Function	-
Sma3	sodium ion binding	GO:0031402	Molecular Function	-
Sma3	sodium ion transport	GO:0006814	Biological Process	-
Sma3	carbohydrate transport	GO:0008643	Biological Process	-
Sma3	response to nematode	GO:0009624	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Major facilitator superfamily	IPR011701	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G00370.1	" ANTR2, PHT4;4 Major facilitator superfamily protein chr4:163153-166111 REVERSE LENGTH=541"	1.0e-16	73%
RefSeq	Arabidopsis thaliana	NP_567175.2	putative anion transporter 2 [Arabidopsis thaliana]	2.0e-16	73%
RefSeq	Populus trichocarpa	XP_002298320.1	predicted protein, partial [Populus trichocarpa]	2.0e-19	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKH1

Fln msg: Distance to subject end: 105 aas, your sequence is shorter than subject: 52 - 671

Fln protein: WVTESGIFCVLPWLTMALSANLGGWIADTLVNKGVSITTVRKVSSLFEYESI

Protein Length: 53

Fln nts: ATGGGTCACAGAATCTGGAATATTTTGTGTTTTACCTTGGCTTACTATGGCCTTGAGTGCAAATTTGGGAGGATGGATCGCTGACACACTTGTGAACAAGGGAGTATCAATCACAACAGTTCGCAAGGTAAGCTCATTATTTGAATATGAATCAATCTC

Fln Alignment:

F7JJN6E01EC3MT___VTESGIFCVLPWLTMALSANLGGWIADTLVNKGVSITTVRKV
B8LKH1_______________LTESGIFCVLPWLTMALSANLGGWIADTLVSRGVSITTVRKV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain