SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene59114

Length: 209 nt

UniGene Fasta

>sp_v3.0_unigene59114
TGTAGAAGGCTATGCACTTGCCTTAGATATGACTGCAAGGGATATTCAAAGTACTGCCAAGGGCTTCCATGGACAGTAGCAAAAGGATATGATACCTTTACTCCAATAAGTAGTTATATACCGAAATCTATGATTCCTGATCAAGACAGCTTGGAACTTTGGTTAAAGGTTGATGGTGAAATCAAACAAAAGGGTTCTACCGAAGACAT

Ace file of the UniGene sp_v3.0_unigene59114

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Fumarylacetoacetate hydrolase, putative n=1 Tax=Ricinus communis RepID=B9RT83_RICCO	-	-	3.0e-20	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Sma3	Isomerase-like protein	-	-	2.076e-09	-

Source	Gene names
Sma3	AT4g15940; At3g16700; At4g15940; GSVIVT00033030001; LOC_Os03g61330; OSJNBa0010E04.1; OSJNBb0027B08.34; Os03g0829000; OsI_14154; OsJ_11310; OsJ_13211; PHYPADRAFT_136708; POPTRDRAFT_883176; RCOM_0681980; dl4011w;

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	hydrolase activity	GO:0016787	Molecular Function	-
Sma3	isomerase activity	GO:0016853	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Fumarylacetoacetase, C-terminal	IPR002529	-	0.0	-
Sma3	Fumarylacetoacetase, C-terminal-related	IPR011234	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G15940.1	Fumarylacetoacetate (FAA) hydrolase family chr4:9038361-9040163 FORWARD LENGTH=222	3.0e-21	70%
RefSeq	Arabidopsis thaliana	NP_193329.1	fumarylacetoacetate hydrolase-like protein [Arabidopsis thaliana]	4.0e-21	70%
RefSeq	Populus trichocarpa	XP_002315509.1	predicted protein [Populus trichocarpa]	3.0e-21	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NP93

Fln msg: Warning!, your query overlaps and the subject is separated, Distance to subject end: 62 aas, your sequence is shorter than subject: 69 - 227

Fln protein: VEGYALALDMTARDIQSTAxxLPWTVAKGYDTFTPISSYIPKSMIPDQDSLELWLKVDGEIKQKGSTED

Protein Length: 70

Fln nts: TGTAGAAGGCTATGCACTTGCCTTAGATATGACTGCAAGGGATATTCAAAGTACTGCCxxxxxxCTTCCATGGACAGTAGCAAAAGGATATGATACCTTTACTCCAATAAGTAGTTATATACCGAAATCTATGATTCCTGATCAAGACAGCTTGGAACTTTGGTTAAAGGTTGATGGTGAAATCAAACAAAAGGGTTCTACCGAAGACAT

Fln Alignment:

F7QVD2L01DKH66___VEGYALALDMTARDIQSTAKxxGLPWTVAKGYDTFTPISSYIPKSMIPDQDSLELWLKVDGEIKQKGSTED
A9NP93_______________VEGYALALDMTAREIQSTAKxxGLPWSVAKGYDTFTPISSYIPKSMVPNQDNLELWLKVDGEIKQKGSTKD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain