SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene58643

Length: 232 nt

UniGene Fasta

>sp_v3.0_unigene58643
ATGGGGATTATAGCAAAGCATGTAATGAGATATCTACGTGGTACAGTTAATTATGGTTTGAGATATTTCTCAAACGGTTATATACAACTGCAGGGATATACAAATTTAGATTGGGCGAGAAGTGCAGAAGACAAAAATAGTACATCCAGAGGTTGCTTTAGTTTGGGCTTTGTTTTCCACCACCTGTAGGTAATATGTGTTAACCCACCCCCTGTGGATAGTGCATATAGTA

Ace file of the UniGene sp_v3.0_unigene58643

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gag-pol polyprotein, putative n=1 Tax=Medicago truncatula RepID=A2Q5V4_MEDTR	-	-	2.0e-07	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	45%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LKV8

Fln msg: your sequence is shorter than subject: 63 - 363

Fln protein: MGIIAKHVMRYLRGTVNYGLRYFSNGYIQLQGYTNLDWARSAEDKNSTSRGCFSLGFVFHHL*

Protein Length: 64

Fln nts: ATGGGGATTATAGCAAAGCATGTAATGAGATATCTACGTGGTACAGTTAATTATGGTTTGAGATATTTCTCAAACGGTTATATACAACTGCAGGGATATACAAATTTAGATTGGGCGAGAAGTGCAGAAGACAAAAATAGTACATCCAGAGGTTGCTTTAGTTTGGGCTTTGTTTTCCACCACCTGTAG___GTAATATGTGTTAACCCACCCCCTGTGGATAGTGCATATAGTA

Fln Alignment:

F5X2MQL01COP9R___KHVMRYLRGTVNYGLRYFSNGYIQLQGYTNLDWARSAEDKNSTSRGCFSLG
B8LKV8_______________KRLLRYIAGTMNHGILYSTSNNLQLVGYTDSDFAGSIDDRKSTSGYAFHLG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain